Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.30 |
| QI | 0|-1|0|1|-1|1|1|0|153 |
| eAED | 0.30 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000049 | Cotesia_flavipes000049 | Cotesia flavipes | gene | scaffold_4 97696..98157 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000049-RA:exon:72 | Cotesia_flavipes000049-RA:exon:72 | Cotesia flavipes | exon | scaffold_4 97696..98157 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000049-RA:cds | Cotesia_flavipes000049-RA:cds | Cotesia flavipes | CDS | scaffold_4 97696..98157 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_flavipes000049-RA ID=Cotesia_flavipes000049-RA|Name=Cotesia_flavipes000049-RA|organism=Cotesia flavipes|type=mRNA|length=462bp|location=Sequence derived from alignment at scaffold_4:97696..98157+ (Cotesia flavipes)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAAAGTACGACCCGACGATCGAAGACTTCTACAGAAAAGAAATAGA
AGTTGATAACTCGCCGTGTGTCCTCGAAATCCTGGACACAGCGGGGACCG
AGCAGTTCGCGAGTATGCGGGACCTGTACATAAAAAACGGACAAGGGTTC
GTGGTGGTCTACAGTTTGACGAACCACCAGACTTTCCAGGACATTAAGGC
CATGAAGGAGCTGATCACGCGGGTCAAGGGGACTGAAAGGGTCCCCGTAC
TCCTGGTCGCCAACAAGCTCGACCTTGAGCACCAGAGGGAGGTCGATACC
GCTGAGGGAAATGCCCTCGCGGAGCTCTGGGGATGCCCCTTCGTCGAGGC
CTCTGCCAAAAACCGTACCAATGTTAATGAAGTGTTTGCAGAAATAGTGA
GAGAGATGAACTTTAGTCCGGAGAAAGAAAAAAAAAGCTATTGCTGTTGC
AGTGTCCTTTAA back to topprotein sequence of Cotesia_flavipes000049-RA >Cotesia_flavipes000049-PA ID=Cotesia_flavipes000049-PA|Name=Cotesia_flavipes000049-RA|organism=Cotesia flavipes|type=polypeptide|length=154bp
MEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF
VVVYSLTNHQTFQDIKAMKELITRVKGTERVPVLLVANKLDLEHQREVDT
AEGNALAELWGCPFVEASAKNRTNVNEVFAEIVREMNFSPEKEKKSYCCC
SVL. back to topmRNA from alignment at scaffold_4:97696..98157+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_flavipes000049-RA ID=Cotesia_flavipes000049-RA|Name=Cotesia_flavipes000049-RA|organism=Cotesia flavipes|type=mRNA|length=462bp|location=Sequence derived from alignment at scaffold_4:97696..98157+ (Cotesia flavipes)
ATGGAAAAGTACGACCCGACGATCGAAGACTTCTACAGAAAAGAAATAGA
AGTTGATAACTCGCCGTGTGTCCTCGAAATCCTGGACACAGCGGGGACCG
AGCAGTTCGCGAGTATGCGGGACCTGTACATAAAAAACGGACAAGGGTTC
GTGGTGGTCTACAGTTTGACGAACCACCAGACTTTCCAGGACATTAAGGC
CATGAAGGAGCTGATCACGCGGGTCAAGGGGACTGAAAGGGTCCCCGTAC
TCCTGGTCGCCAACAAGCTCGACCTTGAGCACCAGAGGGAGGTCGATACC
GCTGAGGGAAATGCCCTCGCGGAGCTCTGGGGATGCCCCTTCGTCGAGGC
CTCTGCCAAAAACCGTACCAATGTTAATGAAGTGTTTGCAGAAATAGTGA
GAGAGATGAACTTTAGTCCGGAGAAAGAAAAAAAAAGCTATTGCTGTTGC
AGTGTCCTTTAA back to topCoding sequence (CDS) from alignment at scaffold_4:97696..98157+ >Cotesia_flavipes000049-RA ID=Cotesia_flavipes000049-RA|Name=Cotesia_flavipes000049-RA|organism=Cotesia flavipes|type=CDS|length=462bp|location=Sequence derived from alignment at scaffold_4:97696..98157+ (Cotesia flavipes)
ATGGAAAAGTACGACCCGACGATCGAAGACTTCTACAGAAAAGAAATAGA
AGTTGATAACTCGCCGTGTGTCCTCGAAATCCTGGACACAGCGGGGACCG
AGCAGTTCGCGAGTATGCGGGACCTGTACATAAAAAACGGACAAGGGTTC
GTGGTGGTCTACAGTTTGACGAACCACCAGACTTTCCAGGACATTAAGGC
CATGAAGGAGCTGATCACGCGGGTCAAGGGGACTGAAAGGGTCCCCGTAC
TCCTGGTCGCCAACAAGCTCGACCTTGAGCACCAGAGGGAGGTCGATACC
GCTGAGGGAAATGCCCTCGCGGAGCTCTGGGGATGCCCCTTCGTCGAGGC
CTCTGCCAAAAACCGTACCAATGTTAATGAAGTGTTTGCAGAAATAGTGA
GAGAGATGAACTTTAGTCCGGAGAAAGAAAAAAAAAGCTATTGCTGTTGC
AGTGTCCTTTAA back to top
Synonyms
The feature 'Cotesia_flavipes000049-RA' has the following synonyms
| Synonym |
|---|
| augustus_masked-scaffold_4-processed-gene-0.16-mRNA-1 |
|