Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.55 |
| QI | 0|0.25|0|1|0|0|5|0|119 |
| eAED | 0.55 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000048 | Cotesia_flavipes000048 | Cotesia flavipes | gene | scaffold_4 96234..96844 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000048-RA:exon:91 | Cotesia_flavipes000048-RA:exon:91 | Cotesia flavipes | exon | scaffold_4 96234..96374 + |
| Cotesia_flavipes000048-RA:exon:92 | Cotesia_flavipes000048-RA:exon:92 | Cotesia flavipes | exon | scaffold_4 96397..96449 + |
| Cotesia_flavipes000048-RA:exon:93 | Cotesia_flavipes000048-RA:exon:93 | Cotesia flavipes | exon | scaffold_4 96550..96590 + |
| Cotesia_flavipes000048-RA:exon:94 | Cotesia_flavipes000048-RA:exon:94 | Cotesia flavipes | exon | scaffold_4 96686..96725 + |
| Cotesia_flavipes000048-RA:exon:95 | Cotesia_flavipes000048-RA:exon:95 | Cotesia flavipes | exon | scaffold_4 96760..96844 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Cotesia_flavipes000048-RA:cds | Cotesia_flavipes000048-RA:cds | Cotesia flavipes | CDS | scaffold_4 96234..96374 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >Cotesia_flavipes000048-RA ID=Cotesia_flavipes000048-RA|Name=Cotesia_flavipes000048-RA|organism=Cotesia flavipes|type=mRNA|length=360bp|location=Sequence derived from alignment at scaffold_4:96234..96844+ (Cotesia flavipes)|Notes=Excludes all bases but those of type(s): exon.
ATGAATAATTTAAAAACTGAAACGTCCGCTAACTTCAGAGTCATAGAAGC
TGTGTGTGGGAGAAGCTGGCGATGGAAACTCGAAATGCACCAATCAATGA
CTTGGAATGTGATCGGAGATTGTAGACGTAGTGTAAGCTGTAGACATCAA
AGTGACGACGACGAAGTTGCCTTTAAGTTTAGTCGCTGGCACTTAATCCG
TGTACAGTTGAGTCCCATCCTGTGGAAGGCTAGTTTCTCCCGAGCTAGAC
TCGTAGCTGTCGTTGCTCTGGCAGGAGACATTGGGACAAAAAGTCTTTGT
AATTCAGCGATCAGTGACAGAGAGCAAGAGCGAGTGAGCGAGAGAGAGAC
AGAGGATTAG back to topprotein sequence of Cotesia_flavipes000048-RA >Cotesia_flavipes000048-PA ID=Cotesia_flavipes000048-PA|Name=Cotesia_flavipes000048-RA|organism=Cotesia flavipes|type=polypeptide|length=120bp
MNNLKTETSANFRVIEAVCGRSWRWKLEMHQSMTWNVIGDCRRSVSCRHQ
SDDDEVAFKFSRWHLIRVQLSPILWKASFSRARLVAVVALAGDIGTKSLC
NSAISDREQERVSERETED. back to topmRNA from alignment at scaffold_4:96234..96844+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Cotesia_flavipes000048-RA ID=Cotesia_flavipes000048-RA|Name=Cotesia_flavipes000048-RA|organism=Cotesia flavipes|type=mRNA|length=611bp|location=Sequence derived from alignment at scaffold_4:96234..96844+ (Cotesia flavipes)
ATGAATAATTTAAAAACTGAAACGTCCGCTAACTTCAGAGTCATAGAAGC
TGTGTGTGGGAGAAGCTGGCGATGGAAACTCGAAATGCACCAATCAATGA
CTTGGAATGTGATCGGAGATTGTAGACGTAGTGTAAGCTGTGTAAGTGTA
TGTATTTTTGAAGAGACATCAAAGTGACGACGACGAAGTTGCCTTTAAGT
TTAGTCGCTGGCACTTGTAACTAGTACCCGTACTATTCAGTGTATTGTGG
TATTGTGTAGTATGCCAATTGCCAGTGATTGCAAGTTTACACAATATATA
TCCAATATATCTATAGAATCCGTGTACAGTTGAGTCCCATCCTGTGGAAG
GCTAGTTGTGAGTAGTTGATATTCAGTGTACAAATAATCCCCATTACACT
GTAATTATTTTAATTAATAATAAATATTAATATTATTTTTTATTGATTGT
AGTCTCCCGAGCTAGACTCGTAGCTGTCGTTGCTCTGGCAGGGTAATTTT
ATTTACCAAAATCACTCCTGGTACAGAGACATTGGGACAAAAAGTCTTTG
TAATTCAGCGATCAGTGACAGAGAGCAAGAGCGAGTGAGCGAGAGAGAGA
CAGAGGATTAG back to topCoding sequence (CDS) from alignment at scaffold_4:96234..96844+ >Cotesia_flavipes000048-RA ID=Cotesia_flavipes000048-RA|Name=Cotesia_flavipes000048-RA|organism=Cotesia flavipes|type=CDS|length=360bp|location=Sequence derived from alignment at scaffold_4:96234..96844+ (Cotesia flavipes)
ATGAATAATTTAAAAACTGAAACGTCCGCTAACTTCAGAGTCATAGAAGC
TGTGTGTGGGAGAAGCTGGCGATGGAAACTCGAAATGCACCAATCAATGA
CTTGGAATGTGATCGGAGATTGTAGACGTAGTGTAAGCTGTAGACATCAA
AGTGACGACGACGAAGTTGCCTTTAAGTTTAGTCGCTGGCACTTAATCCG
TGTACAGTTGAGTCCCATCCTGTGGAAGGCTAGTTTCTCCCGAGCTAGAC
TCGTAGCTGTCGTTGCTCTGGCAGGAGACATTGGGACAAAAAGTCTTTGT
AATTCAGCGATCAGTGACAGAGAGCAAGAGCGAGTGAGCGAGAGAGAGAC
AGAGGATTAG back to top
Synonyms
The feature 'Cotesia_flavipes000048-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold_4-snap-gene-0.162-mRNA-1 |
|