Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.00 |
| QI | 0|-1|0|1|-1|1|1|0|329 |
| eAED | 0.00 |
| Full name | DV3010139 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3010139-RA-CDS | DV3010139-RA-CDS-1 | Daktulosphaira vitifoliae | CDS | scaffold249 169549..170538 - |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3010139-RA-exon | DV3010139-RA-exon-1 | Daktulosphaira vitifoliae | exon | scaffold249 169549..170538 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3010139-RA ID=DV3010139-RA|Name=DV3010139-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=990bp|location=Sequence derived from alignment at scaffold249:169549..170538- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATGAATATTTTCTTACTTTTCCTCAAAAGAAAATTATTTATTCATTGGTT
ATTAAAAATAAGTATATTATGTTTTTTATTAATTATTGGCATTGTTATTT
TTAACATATTCAATCCTACAATAATACACATAAGTTCAAATGATATTCCA
AAATATTTGTTAAAAACAAATATTGATCAAAATGAGTCCCTAAGTAAAAG
ATTTTGTCCTATAGCAAAAATAACAAAACATCAAAAACTGGAACGTATTC
ATGAAAAAGTAAGTGAAATTCAATTAAATGAAATAACAAAAAATGTATCA
TTTGGTGGAGAATGGTTTCCAAAAGATTGTATATCACAACATCATACTGC
TATAATAGTATGCTATCGAAACCGAACTGAACAGTTAAAAATATTTTTAT
ATCATATACATTCATTTTTACAAAAACAAAATTTGCATTATGAAATATTT
GTAGTAGAACAAACATTTGATACAGAGTTCAATCGTGGGAAATTATTTAA
TGTTGGATTTCATGAAGTAATAAAACATTCATCAGCTGGTTGTTTTATCT
TTCATGATGTTGATTTATTACCAGAAAATATTAATAATATTTATGGTTGT
ACATCTTGTCCTCGTCATATGAGTTCTAGCATTAACATATTCAATTATAC
TTTACCTTATTATACTATATTTGGTGGAGCAATTGCTCTCACTCGCAAGC
AATATAAAGATATAAATGGATTTTCTAATGTATTTTATGGATGGGGTGGT
GAAGATGATGATATATTTAACAGAGTATATTATGATGGTTATAGAGTTTG
TAGATATGAATTAGACATTTCAAGGTATACAATGCTCACACACAGTAAAG
AGACTCCAAATGAAAATAGAATGACCTATCTACGAAATGGACCTAAACGG
TTTAAAACAGATGGTGTGAATTCAGTCACATACATTTTAATAAAATATGA
AAAATTACCATTATATACGAAGATATTAGTTAGTATATAG back to topprotein sequence of DV3010139-RA >DV3010139-PA ID=DV3010139-PA|Name=DV3010139-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=330bp
MNIFLLFLKRKLFIHWLLKISILCFLLIIGIVIFNIFNPTIIHISSNDIP
KYLLKTNIDQNESLSKRFCPIAKITKHQKLERIHEKVSEIQLNEITKNVS
FGGEWFPKDCISQHHTAIIVCYRNRTEQLKIFLYHIHSFLQKQNLHYEIF
VVEQTFDTEFNRGKLFNVGFHEVIKHSSAGCFIFHDVDLLPENINNIYGC
TSCPRHMSSSINIFNYTLPYYTIFGGAIALTRKQYKDINGFSNVFYGWGG
EDDDIFNRVYYDGYRVCRYELDISRYTMLTHSKETPNENRMTYLRNGPKR
FKTDGVNSVTYILIKYEKLPLYTKILVSI. back to topmRNA from alignment at scaffold249:169549..170538- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >DV3010139-RA ID=DV3010139-RA|Name=DV3010139-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=990bp|location=Sequence derived from alignment at scaffold249:169549..170538- (Daktulosphaira vitifoliae)
ATGAATATTTTCTTACTTTTCCTCAAAAGAAAATTATTTATTCATTGGTT
ATTAAAAATAAGTATATTATGTTTTTTATTAATTATTGGCATTGTTATTT
TTAACATATTCAATCCTACAATAATACACATAAGTTCAAATGATATTCCA
AAATATTTGTTAAAAACAAATATTGATCAAAATGAGTCCCTAAGTAAAAG
ATTTTGTCCTATAGCAAAAATAACAAAACATCAAAAACTGGAACGTATTC
ATGAAAAAGTAAGTGAAATTCAATTAAATGAAATAACAAAAAATGTATCA
TTTGGTGGAGAATGGTTTCCAAAAGATTGTATATCACAACATCATACTGC
TATAATAGTATGCTATCGAAACCGAACTGAACAGTTAAAAATATTTTTAT
ATCATATACATTCATTTTTACAAAAACAAAATTTGCATTATGAAATATTT
GTAGTAGAACAAACATTTGATACAGAGTTCAATCGTGGGAAATTATTTAA
TGTTGGATTTCATGAAGTAATAAAACATTCATCAGCTGGTTGTTTTATCT
TTCATGATGTTGATTTATTACCAGAAAATATTAATAATATTTATGGTTGT
ACATCTTGTCCTCGTCATATGAGTTCTAGCATTAACATATTCAATTATAC
TTTACCTTATTATACTATATTTGGTGGAGCAATTGCTCTCACTCGCAAGC
AATATAAAGATATAAATGGATTTTCTAATGTATTTTATGGATGGGGTGGT
GAAGATGATGATATATTTAACAGAGTATATTATGATGGTTATAGAGTTTG
TAGATATGAATTAGACATTTCAAGGTATACAATGCTCACACACAGTAAAG
AGACTCCAAATGAAAATAGAATGACCTATCTACGAAATGGACCTAAACGG
TTTAAAACAGATGGTGTGAATTCAGTCACATACATTTTAATAAAATATGA
AAAATTACCATTATATACGAAGATATTAGTTAGTATATAG back to topCoding sequence (CDS) from alignment at scaffold249:169549..170538- >DV3010139-RA ID=DV3010139-RA|Name=DV3010139-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=990bp|location=Sequence derived from alignment at scaffold249:169549..170538- (Daktulosphaira vitifoliae)
ATGAATATTTTCTTACTTTTCCTCAAAAGAAAATTATTTATTCATTGGTT
ATTAAAAATAAGTATATTATGTTTTTTATTAATTATTGGCATTGTTATTT
TTAACATATTCAATCCTACAATAATACACATAAGTTCAAATGATATTCCA
AAATATTTGTTAAAAACAAATATTGATCAAAATGAGTCCCTAAGTAAAAG
ATTTTGTCCTATAGCAAAAATAACAAAACATCAAAAACTGGAACGTATTC
ATGAAAAAGTAAGTGAAATTCAATTAAATGAAATAACAAAAAATGTATCA
TTTGGTGGAGAATGGTTTCCAAAAGATTGTATATCACAACATCATACTGC
TATAATAGTATGCTATCGAAACCGAACTGAACAGTTAAAAATATTTTTAT
ATCATATACATTCATTTTTACAAAAACAAAATTTGCATTATGAAATATTT
GTAGTAGAACAAACATTTGATACAGAGTTCAATCGTGGGAAATTATTTAA
TGTTGGATTTCATGAAGTAATAAAACATTCATCAGCTGGTTGTTTTATCT
TTCATGATGTTGATTTATTACCAGAAAATATTAATAATATTTATGGTTGT
ACATCTTGTCCTCGTCATATGAGTTCTAGCATTAACATATTCAATTATAC
TTTACCTTATTATACTATATTTGGTGGAGCAATTGCTCTCACTCGCAAGC
AATATAAAGATATAAATGGATTTTCTAATGTATTTTATGGATGGGGTGGT
GAAGATGATGATATATTTAACAGAGTATATTATGATGGTTATAGAGTTTG
TAGATATGAATTAGACATTTCAAGGTATACAATGCTCACACACAGTAAAG
AGACTCCAAATGAAAATAGAATGACCTATCTACGAAATGGACCTAAACGG
TTTAAAACAGATGGTGTGAATTCAGTCACATACATTTTAATAAAATATGA
AAAATTACCATTATATACGAAGATATTAGTTAGTATATAG back to top
Synonyms
The feature 'DV3010139-RA' has the following synonyms
| Synonym |
|---|
| augustus_masked-scaffold249-processed-gene-1.33-mRNA-1 |
|