DV3016565-RA (mRNA) Daktulosphaira vitifoliae

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
AED	0.44
QI	0\|0\|0\|0.5\|0\|0\|2\|0\|178
eAED	0.44
Full name	DV3016565

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at scaffold590:71950..73110-
coding sequence from alignment at scaffold590:71950..73110-

spliced messenger RNA

>DV3016565-RA ID=DV3016565-RA|Name=DV3016565-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=537bp|location=Sequence derived from alignment at scaffold590:71950..73110- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGCATCTAGCCTGCCCAAGGATCACCCTTGCTACTCCACCGATAG
AAAGATGATGCCCGGCTTGTTTTCAGACGAANAGAAGATGCCCGGCTTGT
TTTCAGACGAGACCAGTGGCCTCACTCTCTTTGAGATCGCTGCACTTCGA
TCAAAGTGCTACGCATTTGACATGGAAGGCAGCGAACTCATAAAGTCTAA
GGGGATCCGCGGACACGTCGTCCGGAATCATCTGTCTTTAAACGACAACA
AACGGTGTTTGTTCAAAGACGATGATGATGGTGACGATGCGTCAACAAAA
CGAGCATTGGCTGGAGAGAATGCCCGTGCGGTCATCGGAATGATACGTGG
TGCTGAGTGTCCACCGACATTATCGCTACCATACACTCCGTACCGACAGA
ATATGTTAATCCGTTCGTTTGAGCACGAGGTACGCACTTTACGTACAACC
AAGTTGGCGCTTAACCGTTTTGATGATAAGCGCTACACGCTCAACAACAG
AATCGACATTCTTATCATTATACTTGTCGACAGATAG

protein sequence of DV3016565-RA

>DV3016565-PA ID=DV3016565-PA|Name=DV3016565-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=179bp
MDASSLPKDHPCYSTDRKMMPGLFSDEXKMPGLFSDETSGLTLFEIAALR
SKCYAFDMEGSELIKSKGIRGHVVRNHLSLNDNKRCLFKDDDDGDDASTK
RALAGENARAVIGMIRGAECPPTLSLPYTPYRQNMLIRSFEHEVRTLRTT
KLALNRFDDKRYTLNNRIDILIIILVDR.

mRNA from alignment at scaffold590:71950..73110-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>DV3016565-RA ID=DV3016565-RA|Name=DV3016565-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=1161bp|location=Sequence derived from alignment at scaffold590:71950..73110- (Daktulosphaira vitifoliae)
ATGGACGCATCTAGCCTGCCCAAGGATCACCCTTGCTACTCCACCGATAG
AAAGATGATGCCCGGCTTGTTTTCAGACGAANAGAAGATGCCCGGCTTGT
TTTCAGACGAGACCAGTGGCCTCACTCTCTTTGAGATCGCTGCACTTCGA
TCAAAGTGCTACGCATTTGACATGGAAGGCAGCGAACTCATAAAGTCTAA
GGGGATCCGCGGACACGTCGTCCGGAATCATCTGTCTTTAAACGACAACA
AACGGTGTTTGTTCAAAGACGATGATGATGGTGACGATGCGTCAACAAAA
CGAGCATTGGCTGGAGAGAATGCCCGTGCGGTCATCGGAATGATACGTGG
TGCTGAGTGTCCACCGACATTATCGCTACCATACACTCCGTACCGACAGA
ATATGTTAATCCGTTCGTTTGAGCACGAGGTACGCACTTTACGTACAACC
AAGTTGGCGCTTAACCGTTTTGATGATAAGCGCTACACGCTCAACAACAG
AATCGACATTCTTATCATTGTAAAAAATATATCGTCAAGAATTGAAAATT
TTTTTTGTAAATATACATGTATATAAGTAGTTTTAAAACATTTTTTTAAT
GTAACATAATGTAGTAAGAAATTGTATTTTTTCTAAAAAAATATATGTAT
ATGCGTGTACATATCTGTAAATATATATATATAGTACAATAGTAGATGTC
ACATTTTGTNAAACTATAGTTACGTAATGAGATGTCACATTTTAATGGTA
AAGTATTATTCACCAAAACTCTAAGAATACCCTACTGTATTTTACATGCA
TATGATATCGTACAGCTAGGTTTTTGAGCATGTTTTAACCTTTCTGAAGA
ATTAAAAAGAATAAAAATGATTTGAGTTTTATAGAAACATAGTTTTTTTT
CATATGATGTTATTAGAGAAATAAAATCCTAGATAATAATCATTATTTTA
AACATTATTCTTTAAACATATTTATAGTCTTTGTATCCATTATAATTTTA
ATAACAAGTTACGTTAAAAACGAGATTTTCACTATGTCTCAGTATATAAT
AATAACAGCACTATTTTGTCAATGCAACATACGTTTATTTTAAACAATTT
TTTTTTTTTTTATATAAATTAAAAANTTATATACATGTTTTAGATACTTG
TCGACAGATAG

Coding sequence (CDS) from alignment at scaffold590:71950..73110-

>DV3016565-RA ID=DV3016565-RA|Name=DV3016565-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=537bp|location=Sequence derived from alignment at scaffold590:71950..73110- (Daktulosphaira vitifoliae)
ATGGACGCATCTAGCCTGCCCAAGGATCACCCTTGCTACTCCACCGATAG
AAAGATGATGCCCGGCTTGTTTTCAGACGAANAGAAGATGCCCGGCTTGT
TTTCAGACGAGACCAGTGGCCTCACTCTCTTTGAGATCGCTGCACTTCGA
TCAAAGTGCTACGCATTTGACATGGAAGGCAGCGAACTCATAAAGTCTAA
GGGGATCCGCGGACACGTCGTCCGGAATCATCTGTCTTTAAACGACAACA
AACGGTGTTTGTTCAAAGACGATGATGATGGTGACGATGCGTCAACAAAA
CGAGCATTGGCTGGAGAGAATGCCCGTGCGGTCATCGGAATGATACGTGG
TGCTGAGTGTCCACCGACATTATCGCTACCATACACTCCGTACCGACAGA
ATATGTTAATCCGTTCGTTTGAGCACGAGGTACGCACTTTACGTACAACC
AAGTTGGCGCTTAACCGTTTTGATGATAAGCGCTACACGCTCAACAACAG
AATCGACATTCTTATCATTATACTTGTCGACAGATAG