Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.00 |
| QI | 174|1|1|1|0|0|2|0|55 |
| eAED | 0.00 |
| Full name | DV3019683 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3019683-RA-five_prime_UTR | DV3019683-RA-five_prime_UTR-3 | Daktulosphaira vitifoliae | five_prime_UTR | scaffold1207 45343..45516 - |
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3019683-RA ID=DV3019683-RA|Name=DV3019683-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=339bp|location=Sequence derived from alignment at scaffold1207:44996..45516- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATATAATTTAAATTCAAGTTACTCATGAAAAATTAANGTTTAATACATGT
AACGAATATATTTTACTATATTATATACAGTGGATTCCGCTTAATATGGG
CACGTTGGGACCAGAATTGTTTGTCCACATTAAGCGGTTGCCCATAAAAA
CCGAAATTAGTTAAAAAAATTTTAATGATATCAAAAAAAAATTATTTTAC
ACACGTTAATCATACAATTACCACATGGACTACCGTCGTTACCCTCTTGC
ATAAAGAACTTCTGCAACAAATCAATGCATTTTTTAGCCTCTCTAGTTGT
AATTGGTGGTTCAGTATCGTCTTCTTCTTCTTCTTCTTC back to topprotein sequence of DV3019683-RA >DV3019683-PA ID=DV3019683-PA|Name=DV3019683-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=55bp
MISKKNYFTHVNHTITTWTTVVTLLHKELLQQINAFFSLSSCNWWFSIVF
FFFFF back to topmRNA from alignment at scaffold1207:44996..45516- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >DV3019683-RA ID=DV3019683-RA|Name=DV3019683-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=521bp|location=Sequence derived from alignment at scaffold1207:44996..45516- (Daktulosphaira vitifoliae)
ATATAATTTAAATTCAAGTTACTCATGAAAAATTAANGTTTAATACATGT
AACGAATATATTTTACTATATTATATACAGTGGATTCCGCTTAATATGGG
CACGTTGGGACCAGAATTGTTTGTCCACATTAAGCGGTTGCCCATAAAAA
CCGAAATTAGTTAAAAAAATTTTAATGATATCAAAAAAAAATTATTTTAC
ACACGTTAATCATACAATTACCACGTATATTAATTAAATTAAATATAAAG
TACATTATTTTTAAATACTTAATACATACATACATCATACTAAATAAAAT
TACTTTTTGGGTGTGGAAGGTATACAAAATGTTGTAATTGCTCGTTGTCT
AAGCTGTTTTGTGTGGATCTGGTTTACAAAATGGGCGCACGCTTCAAACT
TATCAGATGGACTACCGTCGTTACCCTCTTGCATAAAGAACTTCTGCAAC
AAATCAATGCATTTTTTAGCCTCTCTAGTTGTAATTGGTGGTTCAGTATC
GTCTTCTTCTTCTTCTTCTTC back to topCoding sequence (CDS) from alignment at scaffold1207:44996..45516- >DV3019683-RA ID=DV3019683-RA|Name=DV3019683-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=165bp|location=Sequence derived from alignment at scaffold1207:44996..45516- (Daktulosphaira vitifoliae)
ATGATATCAAAAAAAAATTATTTTACACACGTTAATCATACAATTACCAC
ATGGACTACCGTCGTTACCCTCTTGCATAAAGAACTTCTGCAACAAATCA
ATGCATTTTTTAGCCTCTCTAGTTGTAATTGGTGGTTCAGTATCGTCTTC
TTCTTCTTCTTCTTC back to top
Synonyms
The feature 'DV3019683-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold1207-exonerate_est2genome-gene-0.1-mRNA-1 |
|