Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.24 |
| QI | 0|-1|0|1|-1|1|1|0|129 |
| eAED | 0.26 |
| Full name | DV3020606 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3020606-RA-exon | DV3020606-RA-exon-1 | Daktulosphaira vitifoliae | exon | scaffold1527 2148..2537 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3020606-RA-CDS | DV3020606-RA-CDS-1 | Daktulosphaira vitifoliae | CDS | scaffold1527 2148..2537 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3020606-RA ID=DV3020606-RA|Name=DV3020606-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=390bp|location=Sequence derived from alignment at scaffold1527:2148..2537+ (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
TTGGTTTCGCTTAAAAGTTTTATCAGCACGAAACAGGATAGTTTTGAAGA
AAATGAAGTAAAATTAGCTGCTTTAGATATTTGTAATAAGAACGAGAGTG
AAACACAGCGCAAGCGTAAAGTAAATGTGCGTTTGGCACCTCTTGACTGT
GTTCAAGTACCAACCGTTGAGTTGTCCCCATCACACAAGTTTTTAACCCA
GAGTTTCTTTCCAGTCATAGATCAGTTTGAATATTCATTGCGGATGAGGC
TTGAAGCATATAAACTTGTTGATATTCGTTTTGGTTTTCTCAACAAGTTT
GATAAACTTGATAATGAGGAAATAATTTTAGCAGCAGATAAATTAGTAAA
AATATATGATAATGATTTAGACGACCATTTTGGAAATTAA back to topprotein sequence of DV3020606-RA >DV3020606-PA ID=DV3020606-PA|Name=DV3020606-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=130bp
LVSLKSFISTKQDSFEENEVKLAALDICNKNESETQRKRKVNVRLAPLDC
VQVPTVELSPSHKFLTQSFFPVIDQFEYSLRMRLEAYKLVDIRFGFLNKF
DKLDNEEIILAADKLVKIYDNDLDDHFGN. back to topmRNA from alignment at scaffold1527:2148..2537+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >DV3020606-RA ID=DV3020606-RA|Name=DV3020606-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=390bp|location=Sequence derived from alignment at scaffold1527:2148..2537+ (Daktulosphaira vitifoliae)
TTGGTTTCGCTTAAAAGTTTTATCAGCACGAAACAGGATAGTTTTGAAGA
AAATGAAGTAAAATTAGCTGCTTTAGATATTTGTAATAAGAACGAGAGTG
AAACACAGCGCAAGCGTAAAGTAAATGTGCGTTTGGCACCTCTTGACTGT
GTTCAAGTACCAACCGTTGAGTTGTCCCCATCACACAAGTTTTTAACCCA
GAGTTTCTTTCCAGTCATAGATCAGTTTGAATATTCATTGCGGATGAGGC
TTGAAGCATATAAACTTGTTGATATTCGTTTTGGTTTTCTCAACAAGTTT
GATAAACTTGATAATGAGGAAATAATTTTAGCAGCAGATAAATTAGTAAA
AATATATGATAATGATTTAGACGACCATTTTGGAAATTAA back to topCoding sequence (CDS) from alignment at scaffold1527:2148..2537+ >DV3020606-RA ID=DV3020606-RA|Name=DV3020606-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=390bp|location=Sequence derived from alignment at scaffold1527:2148..2537+ (Daktulosphaira vitifoliae)
TTGGTTTCGCTTAAAAGTTTTATCAGCACGAAACAGGATAGTTTTGAAGA
AAATGAAGTAAAATTAGCTGCTTTAGATATTTGTAATAAGAACGAGAGTG
AAACACAGCGCAAGCGTAAAGTAAATGTGCGTTTGGCACCTCTTGACTGT
GTTCAAGTACCAACCGTTGAGTTGTCCCCATCACACAAGTTTTTAACCCA
GAGTTTCTTTCCAGTCATAGATCAGTTTGAATATTCATTGCGGATGAGGC
TTGAAGCATATAAACTTGTTGATATTCGTTTTGGTTTTCTCAACAAGTTT
GATAAACTTGATAATGAGGAAATAATTTTAGCAGCAGATAAATTAGTAAA
AATATATGATAATGATTTAGACGACCATTTTGGAAATTAA back to top
Synonyms
The feature 'DV3020606-RA' has the following synonyms
| Synonym |
|---|
| augustus_masked-scaffold1527-processed-gene-0.0-mRNA-1 |
|