Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.29 |
QI | 0|0|0|0.5|0|0.5|2|0|69 |
eAED | 0.29 |
Full name | DV3020608 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3020608-RA ID=DV3020608-RA|Name=DV3020608-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=207bp|location=Sequence derived from alignment at scaffold1527:4088..11614- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATGGTAGAGGAAACAAGACAAAGTAATGGCCATGAAATCCAGAAAAATAA TGGTGAAAATAGTGCATTTGCGGCGAAAAAATTGTTTAGAACGCAAAAAC AAAAATATTCAAAATTTGGAAATCAACAAAATAATGATAGAAAACCAGGA ATTTGCAATTTTTGTAAGAAACCAGGTCATTGGAAACTTCGATGTGCTTT AAAAGCG back to topprotein sequence of DV3020608-RA >DV3020608-PA ID=DV3020608-PA|Name=DV3020608-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=69bp
MVEETRQSNGHEIQKNNGENSAFAAKKLFRTQKQKYSKFGNQQNNDRKPG ICNFCKKPGHWKLRCALKA back to topmRNA from alignment at scaffold1527:4088..11614- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >DV3020608-RA ID=DV3020608-RA|Name=DV3020608-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=7527bp|location=Sequence derived from alignment at scaffold1527:4088..11614- (Daktulosphaira vitifoliae) ATGGTAGAGGAAACAAGACAAAGTAATGGCCATGAAATCCAGAAAAATAA
TGGTGAAAATAGTGCATTTGCGGCGAAAAAATTGTTTAGAACGCAAAAAC
AAAAATATTCAAAATTTGGAAATCAACAAAATAATGATAGAAAACCAGGA
ATTTGCAATTTTTGTAAGAAACCAGGTCATTGGAAACGTGATTGCTGGAT
TTTGAAGAAAGAACAAGACGAAAGGAATAAAAACGAATCGAATTCTGGTA
ATGCACTAATAGGCGTTAATTCAATGGTGAACAAAATTAGTGATTTTGAT
AAATGGTATGTGGACTCCGGTGCAAGTGATCACATGACCATTAGAAGAGA
GTGGTTCAGAACTTATGAGTCGTTCAAGATTCAGTTGCCAGTACGTATTG
GTGATGGTAAATATATTATGGCTATTGGTAAAGGTAATATATATGTTCAA
GCAAAAATTGGCGAAAAATGGGTTGACAGTTATTTGTCAAATGTTTTACA
TGTACCTGAACTCAAAGTAAATTTGTTTTCATGTGGAGCGTGCCTTGATA
AAGGTATAATAATGATAACAGACAAAAATGTTTGTACATTTAAAAGAGGA
AATAGTACAGTTGCTGTTGGAATTCGTGAGAATAAATTGTTTTCGATGAT
TTTTAAAACAAGGATTTCGCAAGAGATAGATCAAGTGAATATTGCTGAAA
AAATTCTTACATTACAACAGTGGCATGAAAAACTAGGTCATCAGAATGTT
CAATATGTTAGAAATTACCTAAGGCATATGGGTATTCAATTCACAGATAT
GGAAAACAAATTTTTCTGTGAAGCTTGCATTTATGGTAAACAACACAGAG
AACCATTTACACTGAGCAGTACCAAAACAACAAAACCAGGTCAGATAATT
CACAGTGATGTTTGTGGACCCATGGAAGAAAATTCTCTTGGTGGTAAAAG
ATACTTTGTTATATTCAAAGATGATTACTCTAAGTATACATATGTATATT
TTATGAAACAAAAATCAGAAGTAAAAGAGAAGTTTGAATTATTCTTAAAT
ACAGTGAAAAATCAGTTAAATATATCAGTTCTTACTTTACGAAGTGATTG
TGGTTTGGAATATAAGAATGATGAAGTCAAAGCTATTTTGAATAAATTTG
GTATAAAACATGAGACCAGTGTACCATATACACCACAGCAAAATGGTAAA
GCGGAACGAACAATGCGTATAATAGTAGAAGCAGCTAAAACTATGTTATA
CAGTAAAATTTGTCAAAAAATCTTTGGGCTGAAGCGGTAAATACAGCTGT
ATATGTATTGAATCGTACGTTAAATTCAGATAACAAAGAAAAAACGCCCT
ATGAATTATGGTATAATAAAAGTCCCAATATAAGCAATTTTAAAGTATTT
GGTAGTGAAGTTTATGTTCATATACCAAAAGAAAAACGTAGAAAATGGGA
TCAAAAAGGGAGAAAAGGAATATTTGTTGGGTATTCAGAAGAAACTAAAG
GATACCGCATATGCTTTGATGGAAAAGAAGTTTCATTAAGCAGAGATGTT
ATATTCAAAGAATCTATGGAAATAGAAATCAAAATTAGAAAAGAAGATGA
AGAAATAAATTCAGAAATGGTGGATGAAAGTGAAGAAAATAACATTAATG
ATGAGAATAATGTTGAAAGAAAACAAAATATGGATGAACTTGATCAATCA
GCAGATCAGACTCATGAGCAATTAAAAATGAGACTTAGAGATAGACAAAA
TATAGAAAAACCAGTAAGGTATAGAACAGAAACATTTTATTCAATGTGTG
ATAATCCAGTTACATATGAAGAAGCTATGACACAAGAAAATTCAGAAGAT
TGGAAAGAAGCAATGGATGAAGAAATGTTGTCATTAAAAAATAATGAAAC
CTANTCATTAAAAAAGAATGAAACCTGGAAATTAGTAAATATACCAACAA
ATAAAAAAGTACTTAACAATGGCTGGGTATATCGAACCAAACTCAAGAAA
AATGGAGAAGTCGATAGATTTAAAGCCAGACTAGTTATAAAAGGCTATGC
ACAAGTGCATGGAATTGATTTTCAAGAAACTTTTAGTCCAGTTGTAAAGT
ATGACTCTATACGAGTACTGCTAGCAATAGCAGCAGCCAGAAAATTAAAA
CTCAGACAATTTGATATTAAAACAGCCTTTTTATATGGTGATCTTGAAGA
AGAGATTTACATGAACCAGCCAAAAGGTTATGAAGATGGAACTAAACAAG
TTTGCAAACTTCAACGAAGCTTGTATGGATTAAAACAAGCACCCAGGTGC
TGGAATACAAAATTTAAAAATTTGTTGTTAAAATTTGATCTAAAAGAAAC
AAAGGCAGATCCCTGTGTATTTGTAAGTAATAAAAATGAACAATTAATGA
TTGTAGCTATTTTTGTAGATGATGGGATTATAGCAGCAACAAATGATGAG
CAGGTGGACATGATGGTGAAGTACCTGATGAGCAACTTTGAGACAAAATC
AGGTGAACTTAATCATTTTCTGGGAATTGAAATTGATCAGAGATCAGATG
GGTCAATATTTATACATCAGTCATTATACTGTCAACGCATTTTGGAGAGA
TTCAATATGGATGAATCCAATGTCCTATGCATTCCTGCAGATCCACAACA
CTCATTAGATGCAAATTTATCTGAATCATTACAAGCAGGGGAAGTTCCAT
ACAGAGAAGCAGTAGGAAGTTTGTTATATCTAAGTCAGATCACAAGGCCT
GATATAACATTTGCTGTAAATCTTGTCAGTCGCTATTTAGAAAAGCCTCT
GATAATACATTGGAATGCGGTGAAACGTATTTTAAAATATTTAAAAGGAA
CCTATAACTATGGTTTATTTTTTCATTCTAGGGTGAAACTTAAGTTACAT
GGTTATAGTGATGCAGACTATCCTGATGATACAACAACTAGGCGATCAAC
ATCAGGATACGTTTTCATGATGACTAATGGAATAGTAGCATGGTGTTCAC
AAAGGCAAAAATCAGTAGCACTCTCAACTACTGAGGCTGAATACATGGCA
CTGAGTCAAGCAGTCCAGGAATTAACTTGGTTGACGCTACTAACAAGTGA
TCTTCTGGAAACACAGGGAGAGACACCTGTTTTGTACGCGGACAATCAAA
GTGCCATAAAATTGGTGAAGAATCCAAAATTCCATAAACTAAACATATAG
ATGTTCGTTATCATTATATTCGTGAGAAGTTCAATGAAGGGATGTTTTCA
CTGGAGTATGTGAGCAGCAAAGAGCAGTTAGCTGACATCTTGACCAAGCC
AACACCACGAACAAGATTTCAAGAACTCAGAGAAATGTTAGGAATTAGAT
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATAAACAAATTTTTATTT
TGACTGACCATTATCATCCGCGTGCATACGGCTTACGTAAATATTCCTAC
CGCCGTTTATACCACAGGTATAACGTTAGTCCGACCCTCCCGCCCACAAA
ACACGACTGTACCTAACGCATGATACGTTTACGTACTTAAGTCGCTTTAC
ATGTATATATATATATATATATATATATATTCAAATTATTATTAAAAATA
TATATTAACACACTTTAATCTTATTTAAAAATATATAACTCATTCATTCC
GATTACAAAGGATGAATCCAGTATCGTCATTTTTCGTCACTACCTTCATG
TTCCGGGAGTGAGTAATTTACGCGTATGCTGCTTTCCTTGGATGTGGGAG
CCGTTTCTCAGAATCCCTCCCCGGAATCGAACCCTGATTTCCCGTTACCC
GTTACAACCATGATATTGATAGCACTACTATCATAACATAAAACTAAAAA
GTAAAAAATAAATAGTTAAAAAAAACTAAAAAAACACGCTTTTAAAGCAC
ATCGAACTAAAAAGTTAAAAATAATTTTTAAAATAAGTTTATAATAAATA
TGAATAAAAAATACTAGTATTATTGTGATAAAAACGTCGGTGCTTTGTGC
CATATTTTTCGTATATTGAGCGCCCGACGCTTTTATCACAATAATACTAG
TATTTTTTATTCATAATTATTTTAAACTTATTTTAAAAATTATTTTTAAC
TTTTTAGTTCGATGTGCTTTAAAAGCG back to topCoding sequence (CDS) from alignment at scaffold1527:4088..11614- >DV3020608-RA ID=DV3020608-RA|Name=DV3020608-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=207bp|location=Sequence derived from alignment at scaffold1527:4088..11614- (Daktulosphaira vitifoliae) ATGGTAGAGGAAACAAGACAAAGTAATGGCCATGAAATCCAGAAAAATAA TGGTGAAAATAGTGCATTTGCGGCGAAAAAATTGTTTAGAACGCAAAAAC AAAAATATTCAAAATTTGGAAATCAACAAAATAATGATAGAAAACCAGGA ATTTGCAATTTTTGTAAGAAACCAGGTCATTGGAAACTTCGATGTGCTTT AAAAGCG back to top
Synonyms
The feature 'DV3020608-RA' has the following synonyms
Synonym |
maker-scaffold1527-snap-gene-0.33-mRNA-1 |
|