Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.15 |
| QI | 29|0|0|1|0|0|3|0|212 |
| eAED | 0.37 |
| Full name | DV3020802 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3020802-RA-five_prime_UTR | DV3020802-RA-five_prime_UTR-4 | Daktulosphaira vitifoliae | five_prime_UTR | scaffold613 41757..41785 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3020802-RA ID=DV3020802-RA|Name=DV3020802-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=665bp|location=Sequence derived from alignment at scaffold613:41757..42510+ (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
TTAATAATGTTTTTAACGTTTACAATTCAATGTTAGATCTTATTTTTACA
AATAAGAATCTTTTTAAAGTTAATATGGTGTACAATCCAATTGTTCCTGA
AGATCGATATTATCCTGCATTAGCTATTGATTACCCAACAAATAAAAAAA
TCCGTTCTTTCATGCCATTATACACGTATTTCAGATTTTTCCTATCTTAT
AATTGGTTGAATACTTTTACTCAACTAGACGTTAATTACGCAACATCAAC
TTTGTATGATGCATTACACTTCTCTATTCTTTACTGGGTTCCACGTTGTT
CCAAAAAAGAAAAGCCCACGCCATTTTTAAGGCAACACGTAATCCACTCG
ATTACAGAAAATTTTCTCTTCTACGTGCAAAATACAAATTTTTATCGAAA
AATTGTTACAGAAAATTTTTCTGTGAGTGAATCTGACTTTTGTATTAATC
CAAAAAATTTTTGGAACTTTGTTAGAAAGAGTAAATTTCAACAGTCAATT
CCTAAAACAATTAATTTGAATGGGTTTACTAGTACTAATAGTATAGAAGT
TGCTAATCTAATTCTTTTTTCTGTACCTAAATGTAATACCAACTACCTAA
AAAACAAGCCATTTTATAGAATGATGAGTATTGCTAATAAGGACCCATCA
GATTTATTATATTAT back to topprotein sequence of DV3020802-RA >DV3020802-PA ID=DV3020802-PA|Name=DV3020802-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=212bp
MLDLIFTNKNLFKVNMVYNPIVPEDRYYPALAIDYPTNKKIRSFMPLYTY
FRFFLSYNWLNTFTQLDVNYATSTLYDALHFSILYWVPRCSKKEKPTPFL
RQHVIHSITENFLFYVQNTNFYRKIVTENFSVSESDFCINPKNFWNFVRK
SKFQQSIPKTINLNGFTSTNSIEVANLILFSVPKCNTNYLKNKPFYRMMS
IANKDPSDLLYY back to topmRNA from alignment at scaffold613:41757..42510+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >DV3020802-RA ID=DV3020802-RA|Name=DV3020802-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=754bp|location=Sequence derived from alignment at scaffold613:41757..42510+ (Daktulosphaira vitifoliae)
TTAATAATGTTTTTAACGTTTACAATTCAATGTTAGATCTTATTTTTACA
AATAAGAATCTTTTTAAAGTTAATATGGTGTACAATCCAATTGTTCCTGA
AGATCGATATTATCCTGCATTAGCTATTGATTACCCAACAAATAAAAAAA
TCCGTTCTTTCATGCCGTTGAATCATATTTTTATATTACGAAAGCAGATT
ATACACGTATTTCAGATTTTTCCTATCTTATAATTGGTTGAATACTTTTA
CTCAACTAGACGTTAATTACGCAACATCAACTTTGTATGATGCATTACAC
TTCTCTATTCTTTACTGGGTTCCACGTGTTAACTATAATAAATCTAATTT
TCCTTGATGATTTTCTAAGGATTTGATTGATACAGTGTTCCAAAAAAGAA
AAGCCCACGCCATTTTTAAGGCAACACGTAATCCACTCGATTACAGAAAA
TTTTCTCTTCTACGTGCAAAATACAAATTTTTATCGAAAAATTGTTACAG
AAAATTTTTCTGTGAGTGAATCTGACTTTTGTATTAATCCAAAAAATTTT
TGGAACTTTGTTAGAAAGAGTAAATTTCAACAGTCAATTCCTAAAACAAT
TAATTTGAATGGGTTTACTAGTACTAATAGTATAGAAGTTGCTAATCTAA
TTCTTTTTTCTGTACCTAAATGTAATACCAACTACCTAAAAAACAAGCCA
TTTTATAGAATGATGAGTATTGCTAATAAGGACCCATCAGATTTATTATA
TTAT back to topCoding sequence (CDS) from alignment at scaffold613:41757..42510+ >DV3020802-RA ID=DV3020802-RA|Name=DV3020802-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=636bp|location=Sequence derived from alignment at scaffold613:41757..42510+ (Daktulosphaira vitifoliae)
ATGTTAGATCTTATTTTTACAAATAAGAATCTTTTTAAAGTTAATATGGT
GTACAATCCAATTGTTCCTGAAGATCGATATTATCCTGCATTAGCTATTG
ATTACCCAACAAATAAAAAAATCCGTTCTTTCATGCCATTATACACGTAT
TTCAGATTTTTCCTATCTTATAATTGGTTGAATACTTTTACTCAACTAGA
CGTTAATTACGCAACATCAACTTTGTATGATGCATTACACTTCTCTATTC
TTTACTGGGTTCCACGTTGTTCCAAAAAAGAAAAGCCCACGCCATTTTTA
AGGCAACACGTAATCCACTCGATTACAGAAAATTTTCTCTTCTACGTGCA
AAATACAAATTTTTATCGAAAAATTGTTACAGAAAATTTTTCTGTGAGTG
AATCTGACTTTTGTATTAATCCAAAAAATTTTTGGAACTTTGTTAGAAAG
AGTAAATTTCAACAGTCAATTCCTAAAACAATTAATTTGAATGGGTTTAC
TAGTACTAATAGTATAGAAGTTGCTAATCTAATTCTTTTTTCTGTACCTA
AATGTAATACCAACTACCTAAAAAACAAGCCATTTTATAGAATGATGAGT
ATTGCTAATAAGGACCCATCAGATTTATTATATTAT back to top
Synonyms
The feature 'DV3020802-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold613-snap-gene-0.55-mRNA-1 |
|