Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| AED | 0.21 |
| QI | 0|-1|0|1|-1|0|1|0|306 |
| eAED | 0.25 |
| Full name | DV3021924 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3021924-RA-CDS | DV3021924-RA-CDS-1 | Daktulosphaira vitifoliae | CDS | scaffold1526 2281..3201 - |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| DV3021924-RA-exon | DV3021924-RA-exon-1 | Daktulosphaira vitifoliae | exon | scaffold1526 2281..3201 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3021924-RA ID=DV3021924-RA|Name=DV3021924-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=921bp|location=Sequence derived from alignment at scaffold1526:2281..3201- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATGCTTGGTACTCCTTTTGCTCGTCCCTCAACCCATCTTTCTTCCCTTCA
TCACTTATGGTCCACCGCCCAAAAGTTTAAAAACTGTGTAAGTCGCCGTT
ACCCTTCACTTAACGAAGCATGGTTTCCCTCATTCTGTGATAAAATTGCT
CCTCCATATGTTCCGTCTTTCAAGGAATCTACTCCCTCCTCCATCCCTAT
TCCCTCAACTAACAACTCTGACTCTCATCCCTTAACTATGCCGTTCACTT
CTAAAGAGCTCACTTTAGCAATCTTCTCACGAACTTCTTCTGCTTCTGGT
CTTTATGACATTTCCCCTTTAATGCTAAAATATCTTCCCCAATTTGGTCT
CGATTTTCTCCTCACCATAATTAACTCCCTGTGGTCCAATTGCTTAATTT
CCCCTTCCTGGAAATGTTTTCATGTTATTCCTATACCAAAACTTCACTCT
ACCCCCTCTTCTTTCCGACCTATTGCTCTCTCCTCATCACTTTGTAAAAC
TGTTGAATTTATGTTTAAGTCCCGACTAGACTGGTTTTTAGAAAAGAACA
ACCTCCTCCCAAGTAACCTTTTTGGTTTCAGGAGAGGCATAGGTACAATG
GATTGCCTTTATTCTTTTATTGGTCCCATTAATGAGTTATTTTGTAAAAA
GATATTTTTTCCAGCTGTTTTTATTAATATTAAAGGAGCTTTTGACTACG
TGCATATACCTACCCTTACCGAGCGGTTATATTCAATCAATGTTCCACCT
CTTCTTTGTAATTTTCTATGCTCTCTTTTCTCTTATCGGTCTCTTCATTT
TTCTTCCCCGTCAGGGTTGTCGGTCTCTAGAACTTCCTTTAGAGGTTTAC
CTCAGGGAAGTTGCCTAAGTCCTATTCTTTTCAATATTTGTCACAATATG
ACACAATATGTGTCCTATTAG back to topprotein sequence of DV3021924-RA >DV3021924-PA ID=DV3021924-PA|Name=DV3021924-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=307bp
MLGTPFARPSTHLSSLHHLWSTAQKFKNCVSRRYPSLNEAWFPSFCDKIA
PPYVPSFKESTPSSIPIPSTNNSDSHPLTMPFTSKELTLAIFSRTSSASG
LYDISPLMLKYLPQFGLDFLLTIINSLWSNCLISPSWKCFHVIPIPKLHS
TPSSFRPIALSSSLCKTVEFMFKSRLDWFLEKNNLLPSNLFGFRRGIGTM
DCLYSFIGPINELFCKKIFFPAVFINIKGAFDYVHIPTLTERLYSINVPP
LLCNFLCSLFSYRSLHFSSPSGLSVSRTSFRGLPQGSCLSPILFNICHNM
TQYVSY. back to topmRNA from alignment at scaffold1526:2281..3201- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >DV3021924-RA ID=DV3021924-RA|Name=DV3021924-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=921bp|location=Sequence derived from alignment at scaffold1526:2281..3201- (Daktulosphaira vitifoliae)
ATGCTTGGTACTCCTTTTGCTCGTCCCTCAACCCATCTTTCTTCCCTTCA
TCACTTATGGTCCACCGCCCAAAAGTTTAAAAACTGTGTAAGTCGCCGTT
ACCCTTCACTTAACGAAGCATGGTTTCCCTCATTCTGTGATAAAATTGCT
CCTCCATATGTTCCGTCTTTCAAGGAATCTACTCCCTCCTCCATCCCTAT
TCCCTCAACTAACAACTCTGACTCTCATCCCTTAACTATGCCGTTCACTT
CTAAAGAGCTCACTTTAGCAATCTTCTCACGAACTTCTTCTGCTTCTGGT
CTTTATGACATTTCCCCTTTAATGCTAAAATATCTTCCCCAATTTGGTCT
CGATTTTCTCCTCACCATAATTAACTCCCTGTGGTCCAATTGCTTAATTT
CCCCTTCCTGGAAATGTTTTCATGTTATTCCTATACCAAAACTTCACTCT
ACCCCCTCTTCTTTCCGACCTATTGCTCTCTCCTCATCACTTTGTAAAAC
TGTTGAATTTATGTTTAAGTCCCGACTAGACTGGTTTTTAGAAAAGAACA
ACCTCCTCCCAAGTAACCTTTTTGGTTTCAGGAGAGGCATAGGTACAATG
GATTGCCTTTATTCTTTTATTGGTCCCATTAATGAGTTATTTTGTAAAAA
GATATTTTTTCCAGCTGTTTTTATTAATATTAAAGGAGCTTTTGACTACG
TGCATATACCTACCCTTACCGAGCGGTTATATTCAATCAATGTTCCACCT
CTTCTTTGTAATTTTCTATGCTCTCTTTTCTCTTATCGGTCTCTTCATTT
TTCTTCCCCGTCAGGGTTGTCGGTCTCTAGAACTTCCTTTAGAGGTTTAC
CTCAGGGAAGTTGCCTAAGTCCTATTCTTTTCAATATTTGTCACAATATG
ACACAATATGTGTCCTATTAG back to topCoding sequence (CDS) from alignment at scaffold1526:2281..3201- >DV3021924-RA ID=DV3021924-RA|Name=DV3021924-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=921bp|location=Sequence derived from alignment at scaffold1526:2281..3201- (Daktulosphaira vitifoliae)
ATGCTTGGTACTCCTTTTGCTCGTCCCTCAACCCATCTTTCTTCCCTTCA
TCACTTATGGTCCACCGCCCAAAAGTTTAAAAACTGTGTAAGTCGCCGTT
ACCCTTCACTTAACGAAGCATGGTTTCCCTCATTCTGTGATAAAATTGCT
CCTCCATATGTTCCGTCTTTCAAGGAATCTACTCCCTCCTCCATCCCTAT
TCCCTCAACTAACAACTCTGACTCTCATCCCTTAACTATGCCGTTCACTT
CTAAAGAGCTCACTTTAGCAATCTTCTCACGAACTTCTTCTGCTTCTGGT
CTTTATGACATTTCCCCTTTAATGCTAAAATATCTTCCCCAATTTGGTCT
CGATTTTCTCCTCACCATAATTAACTCCCTGTGGTCCAATTGCTTAATTT
CCCCTTCCTGGAAATGTTTTCATGTTATTCCTATACCAAAACTTCACTCT
ACCCCCTCTTCTTTCCGACCTATTGCTCTCTCCTCATCACTTTGTAAAAC
TGTTGAATTTATGTTTAAGTCCCGACTAGACTGGTTTTTAGAAAAGAACA
ACCTCCTCCCAAGTAACCTTTTTGGTTTCAGGAGAGGCATAGGTACAATG
GATTGCCTTTATTCTTTTATTGGTCCCATTAATGAGTTATTTTGTAAAAA
GATATTTTTTCCAGCTGTTTTTATTAATATTAAAGGAGCTTTTGACTACG
TGCATATACCTACCCTTACCGAGCGGTTATATTCAATCAATGTTCCACCT
CTTCTTTGTAATTTTCTATGCTCTCTTTTCTCTTATCGGTCTCTTCATTT
TTCTTCCCCGTCAGGGTTGTCGGTCTCTAGAACTTCCTTTAGAGGTTTAC
CTCAGGGAAGTTGCCTAAGTCCTATTCTTTTCAATATTTGTCACAATATG
ACACAATATGTGTCCTATTAG back to top
Synonyms
The feature 'DV3021924-RA' has the following synonyms
| Synonym |
|---|
| maker-scaffold1526-exonerate_protein2genome-gene-0.22-mRNA-1 |
|