DV3020613-RA (mRNA) Daktulosphaira vitifoliae

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
AED	0.10
QI	0\|0\|0\|1\|1\|1\|3\|0\|213
eAED	0.10
Full name	DV3020613

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at scaffold1527:26850..27806-
coding sequence from alignment at scaffold1527:26850..27806-

spliced messenger RNA

>DV3020613-RA ID=DV3020613-RA|Name=DV3020613-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=642bp|location=Sequence derived from alignment at scaffold1527:26850..27806- (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAAATCATAGCCCTTTAAAGTTATTGGCAAATGGATCTATTAATCC
TATAAAAAATACAGTGTACCATCTACATAATGTTTGGAGGAACTTAAATT
TTGGTTCCATAGATGCACCATTAATTAAATTGAAAGAAAATATTGAATTG
TATAATTTAAAAGGAATTTCAGTAAATATAATGGAGGAAACATCTAATTG
GGTTATTCTTGTTGCTACTCCAATAATGAAAAGAGCCCAAATGTTAAATT
CTTCAAAAGAAATTATATTTTGTGATAGCAGTAGCAGCTGCGATACATTG
GAAACTACTATCACCATTTTATTGACTGTCACTAAAGCTGGAGCAGTACC
TATTGCTCTATTATTACATCCAGGACAATCCACTGAAAGCTATAAATCAG
CTTTTAAATTTTTAAAGTTAATTCACCCCAAATGTTTTGGAAGCTTCAAT
GCACCGGATATTTTTATGACTGATGATTCTGCTGCTGAAAAACTGGCATT
ACATGAAGTTTGGCCAACTAGCAAACAGTTATTATGTCACTTCCATGTAG
CCCAGAAAGAATGGCGTTGGTTAACTGACTCAAAAAATCAAATTTCCCAG
GACAAAAGGCAGTTTATGATGGAATATTTTAAAAAAGTATAA

protein sequence of DV3020613-RA

>DV3020613-PA ID=DV3020613-PA|Name=DV3020613-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=214bp
MKNHSPLKLLANGSINPIKNTVYHLHNVWRNLNFGSIDAPLIKLKENIEL
YNLKGISVNIMEETSNWVILVATPIMKRAQMLNSSKEIIFCDSSSSCDTL
ETTITILLTVTKAGAVPIALLLHPGQSTESYKSAFKFLKLIHPKCFGSFN
APDIFMTDDSAAEKLALHEVWPTSKQLLCHFHVAQKEWRWLTDSKNQISQ
DKRQFMMEYFKKV.

mRNA from alignment at scaffold1527:26850..27806-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>DV3020613-RA ID=DV3020613-RA|Name=DV3020613-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=957bp|location=Sequence derived from alignment at scaffold1527:26850..27806- (Daktulosphaira vitifoliae)
ATGAAAAATCATAGCCCTTTAAAGTTATTGGCAAATGGATCTATTAATCC
TATAAAAAATACAGTGTACCATCTACATAATGTTTGGAGGAACTTAAATT
TTGGTTCCATAGATGCACCATTAATTAAATTGAAAGAAAATATTGAATTG
TATAATTTAAAAGGTGTATTGATAGTAATTAATAGGCATTTCAATTATGT
AACATAATGCTCACATTATTTATGGTGAGCATTATTCGAGGCCCTTAAAA
TCATAGTGGTGGAAGTCACATTTTTTTGAAAATGTCCAAACAATGAAAAT
ATTACTTATTATATTTATACCATAATGGCCAATATATAATAGAGCATTAA
ATATAAATATTTATGAATTCATAAAACATTTATTATTATTTATTAGGAAT
TTCAGTAAATATAATGGAGGAAACATCTAATTGGGTTATTCTTGTTGCTA
CTCCAATAATGAAAAGAGCCCAAATGTTAAATTCTTCAAAAGAAATTATA
TTTTGTGATAGCAGTAGCAGCTGCGATACATTGGAAACTACTATCACCAT
TTTATTGACTGTCACTAAAGCTGGAGCAGTACCTATTGCTCTATTATTAC
ATCCAGGACAATCCACTGAAAGCTATAAATCAGCTTTTAAATTTTTAAAG
TTAATTCACCCCAAATGTTTTGGAAGCTTCAATGTGAGTTTAATATTTAT
TTATTTATTATAAACAATTATTAATAATTATTATTATACTAATTGACTGT
TGTTTATAATTTCAGGCACCGGATATTTTTATGACTGATGATTCTGCTGC
TGAAAAACTGGCATTACATGAAGTTTGGCCAACTAGCAAACAGTTATTAT
GTCACTTCCATGTAGCCCAGAAAGAATGGCGTTGGTTAACTGACTCAAAA
AATCAAATTTCCCAGGACAAAAGGCAGTTTATGATGGAATATTTTAAAAA
AGTATAA

Coding sequence (CDS) from alignment at scaffold1527:26850..27806-

>DV3020613-RA ID=DV3020613-RA|Name=DV3020613-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=642bp|location=Sequence derived from alignment at scaffold1527:26850..27806- (Daktulosphaira vitifoliae)
ATGAAAAATCATAGCCCTTTAAAGTTATTGGCAAATGGATCTATTAATCC
TATAAAAAATACAGTGTACCATCTACATAATGTTTGGAGGAACTTAAATT
TTGGTTCCATAGATGCACCATTAATTAAATTGAAAGAAAATATTGAATTG
TATAATTTAAAAGGAATTTCAGTAAATATAATGGAGGAAACATCTAATTG
GGTTATTCTTGTTGCTACTCCAATAATGAAAAGAGCCCAAATGTTAAATT
CTTCAAAAGAAATTATATTTTGTGATAGCAGTAGCAGCTGCGATACATTG
GAAACTACTATCACCATTTTATTGACTGTCACTAAAGCTGGAGCAGTACC
TATTGCTCTATTATTACATCCAGGACAATCCACTGAAAGCTATAAATCAG
CTTTTAAATTTTTAAAGTTAATTCACCCCAAATGTTTTGGAAGCTTCAAT
GCACCGGATATTTTTATGACTGATGATTCTGCTGCTGAAAAACTGGCATT
ACATGAAGTTTGGCCAACTAGCAAACAGTTATTATGTCACTTCCATGTAG
CCCAGAAAGAATGGCGTTGGTTAACTGACTCAAAAAATCAAATTTCCCAG
GACAAAAGGCAGTTTATGATGGAATATTTTAAAAAAGTATAA