Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107164505 |
| Model evidence | Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
| Product | CLIP-associating protein 1-like |
| Transcript id | XM_015512361.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107164505 |
| Genbank | XM_015512361.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107164505 | gene541 | Diuraphis noxia | gene | JOTR01000008 1178555..1187403 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| id7040 | id7040 | Diuraphis noxia | exon | JOTR01000008 1178555..1178864 + |
| id7041 | id7041 | Diuraphis noxia | exon | JOTR01000008 1182892..1187403 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015367847.1 | cds778 | Diuraphis noxia | CDS | JOTR01000008 1182994..1187049 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna797 ID=rna797|Name=XM_015512361.1|organism=Diuraphis noxia|type=mRNA|length=4822bp|location=Sequence derived from alignment at JOTR01000008:1178555..1187403+ (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
GTTTGTGCAGTTGCAGCTGAACGCGCACcctacattacatattattctat
catTTGTCCTTgacggaaaaaaatatatattctgttGTTGTTCTWCTGCC
TTCTTTTCAGTTTTCGGTTTTCAGTTcggtaattagtaatttatcgTCGT
GATGATTCTTGTCTCAACCGATAATCGTTGTTTTCGCTCGAAGGTTCATC
GGTGTGTGTGAATTGTCTTCCGTTGTGCGATTTTTGAATAGAAGCGTATC
CAAGAACAAATGTGCAAGAAGATAAACCTGTTATCATTTTGTGACGAGCC
CAAGTTGTCCgACATTAATCATATAGATGcgttatataacaaaaaatcat
AGCATTTAACAGCAGCTTACAATACAGGCCTCATCCCTCAGACATATTCA
CCATCCAAGAAAATGGCTGCTGGGTCGCCCCACGATTTAGATGGTTTTTT
ACCTCTGTTATCAACTTCTGATATAAGAATGAAAGTAACTGTTGgtggta
aattatttacttatttagaaGAACCTAGTAATTCCGTTGAATGTTCTGAT
ATTGGAATGTTTATTGATGGAGTTGTTCAATGGTTATCAAACAGCAATCC
CAAAGTTACTCAATATggaattgaaataataacacaattgaTAACTAGAA
TGAGAACGGATTTTAGACCATATATTTCTACTGTACTACCCCTTGCGGTC
GATCGCCTAGGTGATAGTAAAGATTCGATTAAAGTCAAAGCACTTTttct
tattatgaaattaatggAATGTGATACAATTAGCCCTCAGGCATTATTCG
ACAAAATATCAGCAAATGCATTCTATCATAAAAATAGCAATGTTAAAGAA
GGCGCTATGAAGTTATTATTGTCAACTGTTGAAGAATTTGGAGCTAACTG
TATCACTATATCTAAAATTGTACCCATGATTGTAAAACTTTTAAGTGATC
CTAATGTACAAGTAAGGCATAAAGCATTTGAAACACTTGTTGATTTGTAT
AAACATGTAGGCGAAAAATTACGTGtagatatacaaaaaaaatatacaat
tcctCAAGGTAAAATGACAGACTTGATGAATAAATTTGACGATGCTAAAG
CAGCTGGAGATTTATTGCCAACTGCTTTTGTCGGACTTAGCTTAGCTGAT
GATGATGAGACTGATCGTGCTTGTATGTCAGCACCTAGACGCATTCCTGG
TAGTGTTAAAAGACCTGGTTCATTTTTTCCTCCAAATTCTGCAACGCCCT
TACAACGAACAGGTTCTGTACGAAAACCCAATTCAGCGTCTTCTACCTCT
TCTCATGCTGGTGCTGTTGATGAAGATACTTTTATTCGATCCTTTGAAGA
TGTTCCTACAGTACAGATTTTTAGTGTACGAGATTTAGATGATACTATGA
AAAAATTACACGAGTCTATCCAAGATGGTAATGAACAATGGAATAAACGA
GTtgaatcattgaaaaaaataagatcACTTGTGTTAACTGGTGCAACAAA
ATATGAAGAGTTTTTCAACAATTTGAGATATTTAGAACATTCCTTTCAAA
CATCTGTCAAAGACTTGAGATCTCAGGTTGTTAGAGAAACATGTATTACT
ATAGCATTTTTATCTCAACGTTTGGGAAATAAATTCAATCATTTTGCTGA
atcaatttttagtaatttaatcgACCTTATACCAAATTCAGCAAAAGTAA
CTGCTTCATCTGGATTAATTGCTGTAAGGTTTATTTTAGAACATACACAT
GCTCCTCGTATTATACCTATTCTTGCAAACAGCCTAGGATCTAAGTCAAA
AGATATTCGCCGAGCATGTTGTGAattttttgatcaaattttaCGTACAT
GGCCAACTCAAGCATTAGAAAAACACATAACAATACTTCAGGATTCCATT
AAAAAAGGTATAGCAGATGCTGATTCAGATGCTCGGGTGTTGTCACGAAA
ATCTTATTGGGGATTTTGTGAACATTTTCCAGAACAaggagaaatattat
taaacaagctAGAACCAGCATATCGTAAAGTATTACTTACAAATACTGGA
TCCAATTCATGTTTACCAAAATCTGTTATGGCTGAAAGTACAAGATTACC
TTCTCGTCGTCCAGTCACTCCACAAAGCAACATTTCAATGAGATCAAGCA
GTGCCATAGACTTACAAGCTGCTCAAAGGGCAAAAGCTCGAGCTCAATAT
GCAGCACTTGCTAGACAAAAAGTTAACCCTATGGTGTCCCCTCAATCCGT
TTCCAAAAAACCTAATGAAGACTTGCATCAATCAGAAAGAATTGGGAGGT
CAAGAGGAAGGGTATCAATATCTCAACCAACTAGTCGTTCAGGATCACCA
TCTTCAAGATTTACTTTTGGCCAACCTAAATCAAGAAGAGGCAGTTCTGG
TATACCCAGATCTCAAGATACTAGTAGAGAAGCTAGTCCTAATAGGTATA
GTTCCCTTGGATCACATACGAGTAGTAGACGGCCACCTATTTTGCCTACG
TCTAGACCAATAATGGCGCAAAAAATATTGATGCAGAGTCGAGAAGCAGA
ATCTGCCCTGGCTGATGCTCTTGGTAATACTACTGGTCATAAATCACCAA
GAAAAATATTAGGAAGGTCATTAGATGATCATAGTGATGAAAGTGAGACA
TCTAGTATTTGTTCTGAACGCTCAATTGATTCTCACCGTCGGCCTTCAGA
TTCATTTTATTGGAATGGATCACAGCATCGTTTACATAAAGAAATTTGGG
AAAACTCTAGTTTAGAtatagatgatataatattaaactgtgaAAGTTCA
ACCTGGAATAATCGAAAGGAAGGTTTAGTAAGCTTACAAAGATATTTACA
ACaaggaaatattttaagtgaagTATTATTAAGGAGGCTTAcagatatat
ttacaaaaatgtttatggaTTCTCAAACCAAAGTTATAAGTCTGTTTCTG
GATGCACTAAATGAGTTAATTGTTACCCATAGTCAGTATTTAGAGCATTG
GTTGTATATACTGTTAGCTAAGTTATTCAATAAAGGAGGCTCTGATATTC
TCGGTTCTGtgcattcaaaaatattaaaaacaatggaAATTGTGAGATTA
TCTTTTCCCTGTGATTCTCAGCTAACTGCTGTATTTAAATTTCTCACTGA
TCCTACCCAAACACCTAAtgctaaaatgaaaatatttgcaATGAGTTATA
TATCAAAATTAGCTGTTACAACAGATCCAGGTTCAGCGTTTCCTTCTGCA
GCAGATGGAAAAAAAGATTATGCTACTTTAGCATTAACAAAAATGATTGG
ATGGACAATGGGTAATAATATAAAGCAAGGACCTGAGTTAAGRCGCGCTG
CTCAAGAATCTATTCTTGCATTGTACAGCTTAAATGCATCTCAAATCACA
TTAAGGTTATCCCAGTTACCAGAAGAGTATCAAGAAGCAGTTTCTGGACT
CATTAAAAATAGAGTAAGAAGAAGTAGTGTTGATCAATTAATGTCTCCTA
AATATCATAACCGACAATCACCAACAAATCTTGCTTCACCTCCTTTACAA
CATGATAACACTGATACTTTCAATTCAGAAGAAATATACAAGTCATTAAA
ACAAACTACagctgaaattcaaaaatacagtTTAGAATGCCATTATACGG
GAGAAAGAGATGCTGCTTCTTATGACTCTGGAATAAGTCAAATGTCTGTA
CGTACTGAAActgataatcataatttaaatggttACAAAAATGGTCATAC
TACAACAACAGatggaattataaaaatattagatgatTTAGATAAAGATT
CTCTTCAACTAGAttataaacaatcaaatttaaacCGTTTAAAAGAATTA
ATTAGGGATGGCCCTTCCGATcttcttataaaaaatttcaaaaaaattat
taaagttgttctaaaattattaatggacAATGAATCAATTGTACGGGAAC
AAGCGATTATTTTGATTACAAATCTTGTTCAAAAGCCAGAAATGGTTAct
tgtttttacaatttcactgaattgattatattaaaagtactaAACATGTG
TTGTGATCCATGTAAACCTGTTGTAAAAGTTGCTGAAGAATGTTCATTCG
CCTTAAGTATATCTTTACAACCAGAAACAGTTGTCAGAGTAATTACGCCT
TTGATTTCGGCAAAAGAATTTCCTGTTAATTTAATGGCAATCAAGATGAT
GACTAAACTGGTTGATATGTATGGCAGTGCTCCTGTAGCTGTTCAAATGA
AAGAAATAATGCCTGGTTTGCTACAAGGCTATGATAATCCTGATAGTGCT
GTCCGAAAGTCAGCAGTCTTTTGTATGGTTTCATTACATAAAGTATTTGG
CGAACAGGAATTTGCACCTCATATATCAAGCCTGAATGGCGCCAAGCTTA
AGCTATTAAACCTATACATAGAACGTGCTCAACAGTCTTCTCCGACATCA
CCCAAAACAACTTCATAaactaattattgataatatttattaacgaacaa
aataataagagtCCTATAAAGGTATTCCATTAGAAGTTTTAGAAACTTGT
ATGTGATATTCAAGTTGCTTCTTTTACCTGGCATTGGGATGCTCAACAAA
ATGTTAGTACTTTAGTCATTATTAACTGTTGCCTTTTCATACTCAACCAC
ATAACtacgttttacattttaatatttgatattttttaatcactaacTAG
TGTAAAGTTAATCATTGTATCTAAACTACAATTTTAATCTTTTGTCAAAC
CATCACatctcttaataataaattaaggaaTTGTCtattaaccaaaaata
tataattatttttaccctGTTg back to topprotein sequence of XM_015512361.1 >rna797 ID=rna797|Name=XM_015512361.1|organism=Diuraphis noxia|type=polypeptide|length=1352bp
MAAGSPHDLDGFLPLLSTSDIRMKVTVGGKLFTYLEEPSNSVECSDIGMF
IDGVVQWLSNSNPKVTQYGIEIITQLITRMRTDFRPYISTVLPLAVDRLG
DSKDSIKVKALFLIMKLMECDTISPQALFDKISANAFYHKNSNVKEGAMK
LLLSTVEEFGANCITISKIVPMIVKLLSDPNVQVRHKAFETLVDLYKHVG
EKLRVDIQKKYTIPQGKMTDLMNKFDDAKAAGDLLPTAFVGLSLADDDET
DRACMSAPRRIPGSVKRPGSFFPPNSATPLQRTGSVRKPNSASSTSSHAG
AVDEDTFIRSFEDVPTVQIFSVRDLDDTMKKLHESIQDGNEQWNKRVESL
KKIRSLVLTGATKYEEFFNNLRYLEHSFQTSVKDLRSQVVRETCITIAFL
SQRLGNKFNHFAESIFSNLIDLIPNSAKVTASSGLIAVRFILEHTHAPRI
IPILANSLGSKSKDIRRACCEFFDQILRTWPTQALEKHITILQDSIKKGI
ADADSDARVLSRKSYWGFCEHFPEQGEILLNKLEPAYRKVLLTNTGSNSC
LPKSVMAESTRLPSRRPVTPQSNISMRSSSAIDLQAAQRAKARAQYAALA
RQKVNPMVSPQSVSKKPNEDLHQSERIGRSRGRVSISQPTSRSGSPSSRF
TFGQPKSRRGSSGIPRSQDTSREASPNRYSSLGSHTSSRRPPILPTSRPI
MAQKILMQSREAESALADALGNTTGHKSPRKILGRSLDDHSDESETSSIC
SERSIDSHRRPSDSFYWNGSQHRLHKEIWENSSLDIDDIILNCESSTWNN
RKEGLVSLQRYLQQGNILSEVLLRRLTDIFTKMFMDSQTKVISLFLDALN
ELIVTHSQYLEHWLYILLAKLFNKGGSDILGSVHSKILKTMEIVRLSFPC
DSQLTAVFKFLTDPTQTPNAKMKIFAMSYISKLAVTTDPGSAFPSAADGK
KDYATLALTKMIGWTMGNNIKQGPELRRAAQESILALYSLNASQITLRLS
QLPEEYQEAVSGLIKNRVRRSSVDQLMSPKYHNRQSPTNLASPPLQHDNT
DTFNSEEIYKSLKQTTAEIQKYSLECHYTGERDAASYDSGISQMSVRTET
DNHNLNGYKNGHTTTTDGIIKILDDLDKDSLQLDYKQSNLNRLKELIRDG
PSDLLIKNFKKIIKVVLKLLMDNESIVREQAIILITNLVQKPEMVTCFYN
FTELIILKVLNMCCDPCKPVVKVAEECSFALSISLQPETVVRVITPLISA
KEFPVNLMAIKMMTKLVDMYGSAPVAVQMKEIMPGLLQGYDNPDSAVRKS
AVFCMVSLHKVFGEQEFAPHISSLNGAKLKLLNLYIERAQQSSPTSPKTT
S. back to topmRNA from alignment at JOTR01000008:1178555..1187403+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna797 ID=rna797|Name=XM_015512361.1|organism=Diuraphis noxia|type=mRNA|length=8849bp|location=Sequence derived from alignment at JOTR01000008:1178555..1187403+ (Diuraphis noxia)
GTTTGTGCAGTTGCAGCTGAACGCGCACcctacattacatattattctat
catTTGTCCTTgacggaaaaaaatatatattctgttGTTGTTCTWCTGCC
TTCTTTTCAGTTTTCGGTTTTCAGTTcggtaattagtaatttatcgTCGT
GATGATTCTTGTCTCAACCGATAATCGTTGTTTTCGCTCGAAGGTTCATC
GGTGTGTGTGAATTGTCTTCCGTTGTGCGATTTTTGAATAGAAGCGTATC
CAAGAACAAATGTGCAAGAAGATAAACCTGTTATCATTTTGTGACGAGCC
CAAGTTGTCCGTAAGTCCTTTGccatttatattgttttcatgaatccttt
ttagtttttttttttaaatttattatatacatcgtcACTATATTTCCTGT
CGATCGTCTACAGCCAATWTAGGACATTTTGATTGaccaagtaaatattt
aaaattcgtgATAAGGTCTTCTATAgacctttataatatacttacaaagG
CCTTTTTTGAGCTATTAAATGCCGYCAAATTATGTTTACatcatgttaat
aaaaaataaataaatgtgaagGGAATATATTGAGAAATAGTACTTATGTT
TATCCAGTAAAATGTGTGTAGATACAAACACTAATTtaggaaaaaacaaa
acattaaaaactgttCATTAGTTATTTCCGGCACACTGWGGCCGAGTCAC
ATTTGATTTGAAATccaccataatatttataatcaatgttgtATCCAATT
TACTTTATCTAATATTTCTACAACAAACCAATTATCTACTCTTGTTAAGT
TTAGACAAATAAAACTAAAGTGGGTTATAAAATTACAAGTTTTACCTAAA
TAAgtttatcattttcaaataatcacAATCCTGTGACACTAAAAGTTAAG
ATTAAACTTTCTAAATATGATCATTacttggtattttaaaatatattgta
tgaacaaattataaatatagctaatataaattataaatgtatacaaatat
tttaaatttatagtgacACTTCAGACAATAATTACTTTTAGCTATTTTCT
GAACAGCGAGTTTAgtgcaattaaaatatcataattttatttataatgta
ttgttgCTGATTCACCTAGTTAATACATTTCTTATATTCAAGGAtttgag
taaataatttttatttatgtaggtatctatctttttttatttaaatatcc
attagttaaaaataaatattttggcatTCAATAAGAATTACTAATTGGTA
CCTAGTttacaaaatcataaattatcaataggtaggtatttggtgcatat
ttaatgaattgttaattttacacttatataaaacttttatttattagttg
ggTGGTAAAGTTAGAGATATGAGGGGATTTGTCTAGTGTATATGCCAGGC
TAAAACAGTTTTAAAGACTATTAGTGCCATTTCCTACTCATTTTTTGTAT
AGACATAAAATCTAACCATTTATTACCATTAAAAGTAAAGTACTTATACC
TGTATAGTTGATAGAGTTTATGTCAGTGGCGTGACAAAGGATTATAtttg
aggcacgtgcctcagtttgaggggtggtaggtgtcctcaaagatcatctg
atgtgttaaaaaagcattattatttaaatgaataaatatattttatctta
aaaaatttttttaatgttttttgtgatgKGTGGAGTGGGTGGTTGGTCTG
ACAATATAACTGTGCCTCATAACTTAATGAATTTCGCCACACTGgtttat
gttttaacttttatatactaatgtatattttatcaaattaggTAGCTGCT
AAGAAatcaaattagtttattttttttatcaagacaATATTCACAAATTT
TGTACTTTAAGGTAATAGTATRAGTAATATTGAGGCAGAACAGTTTGATT
AAAAGWGTCCGTTGAcacaaattcaaaaatttcaatCAATTAAACTCTTA
CTTTAGCTCAACAGTTCCAAAATAATGTTTCGCCTCatcattaaagtttt
tttttgtctcaaCATTTATAACAGATCTTGAGACATGATTTCATCCTATA
GTTCCTTCTTTAAGATTcctcaaaattatataactctTTTGCCCCTTTAC
GATAGTTACAACTTACATTATCANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaa
aaaaaatattttataaaattgtgatttaatGCAATACCTACTAGAATGTC
ACAGCTAAAAAGTGATGAAAttgatttaacttaattttgcATTCAAATTT
GCACCTTAATAATAagctatgtattattttgttacaggACATTAATCATA
TAGATGcgttatataacaaaaaatcatAGCATTTAACAGCAGCTTACAAT
ACAGGCCTCATCCCTCAGACATATTCACCATCCAAGAAAATGGCTGCTGG
GTCGCCCCACGATTTAGATGGTTTTTTACCTCTGTTATCAACTTCTGATA
TAAGAATGAAAGTAACTGTTGgtggtaaattatttacttatttagaaGAA
CCTAGTAATTCCGTTGAATGTTCTGATATTGGAATGTTTATTGATGGAGT
TGTTCAATGGTTATCAAACAGCAATCCCAAAGTTACTCAATATggaattg
aaataataacacaattgaTAACTAGAATGAGAACGGATTTTAGACCATAT
ATTTCTACTGTACTACCCCTTGCGGTCGATCGCCTAGGTGATAGTAAAGA
TTCGATTAAAGTCAAAGCACTTTttcttattatgaaattaatggAATGTG
ATACAATTAGCCCTCAGGCATTATTCGACAAAATATCAGCAAATGCATTC
TATCATAAAAATAGCAATGTTAAAGAAGGCGCTATGAAGTTATTATTGTC
AACTGTTGAAGAATTTGGAGCTAACTGTATCACTATATCTAAAATTGTAC
CCATGATTGTAAAACTTTTAAGTGATCCTAATGTACAAGTAAGGCATAAA
GCATTTGAAACACTTGTTGATTTGTATAAACATGTAGGCGAAAAATTACG
TGtagatatacaaaaaaaatatacaattcctCAAGGTAAAATGACAGACT
TGATGAATAAATTTGACGATGCTAAAGCAGCTGGAGATTTATTGCCAACT
GCTTTTGTCGGACTTAGCTTAGCTGATGATGATGAGACTGATCGTGCTTG
TATGTCAGCACCTAGACGCATTCCTGGTAGTGTTAAAAGACCTGGTTCAT
TTTTTCCTCCAAATTCTGCAACGCCCTTACAACGAACAGGTTCTGTACGA
AAACCCAATTCAGCGTCTTCTACCTCTTCTCATGCTGGTGCTGTTGATGA
AGATACTTTTATTCGATCCTTTGAAGATGTTCCTACAGTACAGATTTTTA
GTGTACGAGATTTAGATGATACTATGAAAAAATTACACGAGTCTATCCAA
GATGGTAATGAACAATGGAATAAACGAGTtgaatcattgaaaaaaataag
atcACTTGTGTTAACTGGTGCAACAAAATATGAAGAGTTTTTCAACAATT
TGAGATATTTAGAACATTCCTTTCAAACATCTGTCAAAGACTTGAGATCT
CAGGTTGTTAGAGAAACATGTATTACTATAGCATTTTTATCTCAACGTTT
GGGAAATAAATTCAATCATTTTGCTGAatcaatttttagtaatttaatcg
ACCTTATACCAAATTCAGCAAAAGTAACTGCTTCATCTGGATTAATTGCT
GTAAGGTTTATTTTAGAACATACACATGCTCCTCGTATTATACCTATTCT
TGCAAACAGCCTAGGATCTAAGTCAAAAGATATTCGCCGAGCATGTTGTG
AattttttgatcaaattttaCGTACATGGCCAACTCAAGCATTAGAAAAA
CACATAACAATACTTCAGGATTCCATTAAAAAAGGTATAGCAGATGCTGA
TTCAGATGCTCGGGTGTTGTCACGAAAATCTTATTGGGGATTTTGTGAAC
ATTTTCCAGAACAaggagaaatattattaaacaagctAGAACCAGCATAT
CGTAAAGTATTACTTACAAATACTGGATCCAATTCATGTTTACCAAAATC
TGTTATGGCTGAAAGTACAAGATTACCTTCTCGTCGTCCAGTCACTCCAC
AAAGCAACATTTCAATGAGATCAAGCAGTGCCATAGACTTACAAGCTGCT
CAAAGGGCAAAAGCTCGAGCTCAATATGCAGCACTTGCTAGACAAAAAGT
TAACCCTATGGTGTCCCCTCAATCCGTTTCCAAAAAACCTAATGAAGACT
TGCATCAATCAGAAAGAATTGGGAGGTCAAGAGGAAGGGTATCAATATCT
CAACCAACTAGTCGTTCAGGATCACCATCTTCAAGATTTACTTTTGGCCA
ACCTAAATCAAGAAGAGGCAGTTCTGGTATACCCAGATCTCAAGATACTA
GTAGAGAAGCTAGTCCTAATAGGTATAGTTCCCTTGGATCACATACGAGT
AGTAGACGGCCACCTATTTTGCCTACGTCTAGACCAATAATGGCGCAAAA
AATATTGATGCAGAGTCGAGAAGCAGAATCTGCCCTGGCTGATGCTCTTG
GTAATACTACTGGTCATAAATCACCAAGAAAAATATTAGGAAGGTCATTA
GATGATCATAGTGATGAAAGTGAGACATCTAGTATTTGTTCTGAACGCTC
AATTGATTCTCACCGTCGGCCTTCAGATTCATTTTATTGGAATGGATCAC
AGCATCGTTTACATAAAGAAATTTGGGAAAACTCTAGTTTAGAtatagat
gatataatattaaactgtgaAAGTTCAACCTGGAATAATCGAAAGGAAGG
TTTAGTAAGCTTACAAAGATATTTACAACaaggaaatattttaagtgaag
TATTATTAAGGAGGCTTAcagatatatttacaaaaatgtttatggaTTCT
CAAACCAAAGTTATAAGTCTGTTTCTGGATGCACTAAATGAGTTAATTGT
TACCCATAGTCAGTATTTAGAGCATTGGTTGTATATACTGTTAGCTAAGT
TATTCAATAAAGGAGGCTCTGATATTCTCGGTTCTGtgcattcaaaaata
ttaaaaacaatggaAATTGTGAGATTATCTTTTCCCTGTGATTCTCAGCT
AACTGCTGTATTTAAATTTCTCACTGATCCTACCCAAACACCTAAtgcta
aaatgaaaatatttgcaATGAGTTATATATCAAAATTAGCTGTTACAACA
GATCCAGGTTCAGCGTTTCCTTCTGCAGCAGATGGAAAAAAAGATTATGC
TACTTTAGCATTAACAAAAATGATTGGATGGACAATGGGTAATAATATAA
AGCAAGGACCTGAGTTAAGRCGCGCTGCTCAAGAATCTATTCTTGCATTG
TACAGCTTAAATGCATCTCAAATCACATTAAGGTTATCCCAGTTACCAGA
AGAGTATCAAGAAGCAGTTTCTGGACTCATTAAAAATAGAGTAAGAAGAA
GTAGTGTTGATCAATTAATGTCTCCTAAATATCATAACCGACAATCACCA
ACAAATCTTGCTTCACCTCCTTTACAACATGATAACACTGATACTTTCAA
TTCAGAAGAAATATACAAGTCATTAAAACAAACTACagctgaaattcaaa
aatacagtTTAGAATGCCATTATACGGGAGAAAGAGATGCTGCTTCTTAT
GACTCTGGAATAAGTCAAATGTCTGTACGTACTGAAActgataatcataa
tttaaatggttACAAAAATGGTCATACTACAACAACAGatggaattataa
aaatattagatgatTTAGATAAAGATTCTCTTCAACTAGAttataaacaa
tcaaatttaaacCGTTTAAAAGAATTAATTAGGGATGGCCCTTCCGATct
tcttataaaaaatttcaaaaaaattattaaagttgttctaaaattattaa
tggacAATGAATCAATTGTACGGGAACAAGCGATTATTTTGATTACAAAT
CTTGTTCAAAAGCCAGAAATGGTTActtgtttttacaatttcactgaatt
gattatattaaaagtactaAACATGTGTTGTGATCCATGTAAACCTGTTG
TAAAAGTTGCTGAAGAATGTTCATTCGCCTTAAGTATATCTTTACAACCA
GAAACAGTTGTCAGAGTAATTACGCCTTTGATTTCGGCAAAAGAATTTCC
TGTTAATTTAATGGCAATCAAGATGATGACTAAACTGGTTGATATGTATG
GCAGTGCTCCTGTAGCTGTTCAAATGAAAGAAATAATGCCTGGTTTGCTA
CAAGGCTATGATAATCCTGATAGTGCTGTCCGAAAGTCAGCAGTCTTTTG
TATGGTTTCATTACATAAAGTATTTGGCGAACAGGAATTTGCACCTCATA
TATCAAGCCTGAATGGCGCCAAGCTTAAGCTATTAAACCTATACATAGAA
CGTGCTCAACAGTCTTCTCCGACATCACCCAAAACAACTTCATAaactaa
ttattgataatatttattaacgaacaaaataataagagtCCTATAAAGGT
ATTCCATTAGAAGTTTTAGAAACTTGTATGTGATATTCAAGTTGCTTCTT
TTACCTGGCATTGGGATGCTCAACAAAATGTTAGTACTTTAGTCATTATT
AACTGTTGCCTTTTCATACTCAACCACATAACtacgttttacattttaat
atttgatattttttaatcactaacTAGTGTAAAGTTAATCATTGTATCTA
AACTACAATTTTAATCTTTTGTCAAACCATCACatctcttaataataaat
taaggaaTTGTCtattaaccaaaaatatataattatttttaccctGTTg back to topCoding sequence (CDS) from alignment at JOTR01000008:1178555..1187403+ >rna797 ID=rna797|Name=XM_015512361.1|organism=Diuraphis noxia|type=CDS|length=4056bp|location=Sequence derived from alignment at JOTR01000008:1178555..1187403+ (Diuraphis noxia)
ATGGCTGCTGGGTCGCCCCACGATTTAGATGGTTTTTTACCTCTGTTATC
AACTTCTGATATAAGAATGAAAGTAACTGTTGgtggtaaattatttactt
atttagaaGAACCTAGTAATTCCGTTGAATGTTCTGATATTGGAATGTTT
ATTGATGGAGTTGTTCAATGGTTATCAAACAGCAATCCCAAAGTTACTCA
ATATggaattgaaataataacacaattgaTAACTAGAATGAGAACGGATT
TTAGACCATATATTTCTACTGTACTACCCCTTGCGGTCGATCGCCTAGGT
GATAGTAAAGATTCGATTAAAGTCAAAGCACTTTttcttattatgaaatt
aatggAATGTGATACAATTAGCCCTCAGGCATTATTCGACAAAATATCAG
CAAATGCATTCTATCATAAAAATAGCAATGTTAAAGAAGGCGCTATGAAG
TTATTATTGTCAACTGTTGAAGAATTTGGAGCTAACTGTATCACTATATC
TAAAATTGTACCCATGATTGTAAAACTTTTAAGTGATCCTAATGTACAAG
TAAGGCATAAAGCATTTGAAACACTTGTTGATTTGTATAAACATGTAGGC
GAAAAATTACGTGtagatatacaaaaaaaatatacaattcctCAAGGTAA
AATGACAGACTTGATGAATAAATTTGACGATGCTAAAGCAGCTGGAGATT
TATTGCCAACTGCTTTTGTCGGACTTAGCTTAGCTGATGATGATGAGACT
GATCGTGCTTGTATGTCAGCACCTAGACGCATTCCTGGTAGTGTTAAAAG
ACCTGGTTCATTTTTTCCTCCAAATTCTGCAACGCCCTTACAACGAACAG
GTTCTGTACGAAAACCCAATTCAGCGTCTTCTACCTCTTCTCATGCTGGT
GCTGTTGATGAAGATACTTTTATTCGATCCTTTGAAGATGTTCCTACAGT
ACAGATTTTTAGTGTACGAGATTTAGATGATACTATGAAAAAATTACACG
AGTCTATCCAAGATGGTAATGAACAATGGAATAAACGAGTtgaatcattg
aaaaaaataagatcACTTGTGTTAACTGGTGCAACAAAATATGAAGAGTT
TTTCAACAATTTGAGATATTTAGAACATTCCTTTCAAACATCTGTCAAAG
ACTTGAGATCTCAGGTTGTTAGAGAAACATGTATTACTATAGCATTTTTA
TCTCAACGTTTGGGAAATAAATTCAATCATTTTGCTGAatcaatttttag
taatttaatcgACCTTATACCAAATTCAGCAAAAGTAACTGCTTCATCTG
GATTAATTGCTGTAAGGTTTATTTTAGAACATACACATGCTCCTCGTATT
ATACCTATTCTTGCAAACAGCCTAGGATCTAAGTCAAAAGATATTCGCCG
AGCATGTTGTGAattttttgatcaaattttaCGTACATGGCCAACTCAAG
CATTAGAAAAACACATAACAATACTTCAGGATTCCATTAAAAAAGGTATA
GCAGATGCTGATTCAGATGCTCGGGTGTTGTCACGAAAATCTTATTGGGG
ATTTTGTGAACATTTTCCAGAACAaggagaaatattattaaacaagctAG
AACCAGCATATCGTAAAGTATTACTTACAAATACTGGATCCAATTCATGT
TTACCAAAATCTGTTATGGCTGAAAGTACAAGATTACCTTCTCGTCGTCC
AGTCACTCCACAAAGCAACATTTCAATGAGATCAAGCAGTGCCATAGACT
TACAAGCTGCTCAAAGGGCAAAAGCTCGAGCTCAATATGCAGCACTTGCT
AGACAAAAAGTTAACCCTATGGTGTCCCCTCAATCCGTTTCCAAAAAACC
TAATGAAGACTTGCATCAATCAGAAAGAATTGGGAGGTCAAGAGGAAGGG
TATCAATATCTCAACCAACTAGTCGTTCAGGATCACCATCTTCAAGATTT
ACTTTTGGCCAACCTAAATCAAGAAGAGGCAGTTCTGGTATACCCAGATC
TCAAGATACTAGTAGAGAAGCTAGTCCTAATAGGTATAGTTCCCTTGGAT
CACATACGAGTAGTAGACGGCCACCTATTTTGCCTACGTCTAGACCAATA
ATGGCGCAAAAAATATTGATGCAGAGTCGAGAAGCAGAATCTGCCCTGGC
TGATGCTCTTGGTAATACTACTGGTCATAAATCACCAAGAAAAATATTAG
GAAGGTCATTAGATGATCATAGTGATGAAAGTGAGACATCTAGTATTTGT
TCTGAACGCTCAATTGATTCTCACCGTCGGCCTTCAGATTCATTTTATTG
GAATGGATCACAGCATCGTTTACATAAAGAAATTTGGGAAAACTCTAGTT
TAGAtatagatgatataatattaaactgtgaAAGTTCAACCTGGAATAAT
CGAAAGGAAGGTTTAGTAAGCTTACAAAGATATTTACAACaaggaaatat
tttaagtgaagTATTATTAAGGAGGCTTAcagatatatttacaaaaatgt
ttatggaTTCTCAAACCAAAGTTATAAGTCTGTTTCTGGATGCACTAAAT
GAGTTAATTGTTACCCATAGTCAGTATTTAGAGCATTGGTTGTATATACT
GTTAGCTAAGTTATTCAATAAAGGAGGCTCTGATATTCTCGGTTCTGtgc
attcaaaaatattaaaaacaatggaAATTGTGAGATTATCTTTTCCCTGT
GATTCTCAGCTAACTGCTGTATTTAAATTTCTCACTGATCCTACCCAAAC
ACCTAAtgctaaaatgaaaatatttgcaATGAGTTATATATCAAAATTAG
CTGTTACAACAGATCCAGGTTCAGCGTTTCCTTCTGCAGCAGATGGAAAA
AAAGATTATGCTACTTTAGCATTAACAAAAATGATTGGATGGACAATGGG
TAATAATATAAAGCAAGGACCTGAGTTAAGRCGCGCTGCTCAAGAATCTA
TTCTTGCATTGTACAGCTTAAATGCATCTCAAATCACATTAAGGTTATCC
CAGTTACCAGAAGAGTATCAAGAAGCAGTTTCTGGACTCATTAAAAATAG
AGTAAGAAGAAGTAGTGTTGATCAATTAATGTCTCCTAAATATCATAACC
GACAATCACCAACAAATCTTGCTTCACCTCCTTTACAACATGATAACACT
GATACTTTCAATTCAGAAGAAATATACAAGTCATTAAAACAAACTACagc
tgaaattcaaaaatacagtTTAGAATGCCATTATACGGGAGAAAGAGATG
CTGCTTCTTATGACTCTGGAATAAGTCAAATGTCTGTACGTACTGAAAct
gataatcataatttaaatggttACAAAAATGGTCATACTACAACAACAGa
tggaattataaaaatattagatgatTTAGATAAAGATTCTCTTCAACTAG
AttataaacaatcaaatttaaacCGTTTAAAAGAATTAATTAGGGATGGC
CCTTCCGATcttcttataaaaaatttcaaaaaaattattaaagttgttct
aaaattattaatggacAATGAATCAATTGTACGGGAACAAGCGATTATTT
TGATTACAAATCTTGTTCAAAAGCCAGAAATGGTTActtgtttttacaat
ttcactgaattgattatattaaaagtactaAACATGTGTTGTGATCCATG
TAAACCTGTTGTAAAAGTTGCTGAAGAATGTTCATTCGCCTTAAGTATAT
CTTTACAACCAGAAACAGTTGTCAGAGTAATTACGCCTTTGATTTCGGCA
AAAGAATTTCCTGTTAATTTAATGGCAATCAAGATGATGACTAAACTGGT
TGATATGTATGGCAGTGCTCCTGTAGCTGTTCAAATGAAAGAAATAATGC
CTGGTTTGCTACAAGGCTATGATAATCCTGATAGTGCTGTCCGAAAGTCA
GCAGTCTTTTGTATGGTTTCATTACATAAAGTATTTGGCGAACAGGAATT
TGCACCTCATATATCAAGCCTGAATGGCGCCAAGCTTAAGCTATTAAACC
TATACATAGAACGTGCTCAACAGTCTTCTCCGACATCACCCAAAACAACT
TCATAa back to top
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