Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107164947 |
| Model evidence | Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments |
| Product | uncharacterized LOC107164947 |
| Transcript id | XM_015512980.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107164947 |
| Genbank | XM_015512980.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107164947 | gene602 | Diuraphis noxia | gene | JOTR01000010 907337..908460 - |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015368466.1 | cds844 | Diuraphis noxia | CDS | JOTR01000010 907866..908324 - |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| id7469 | id7469 | Diuraphis noxia | exon | JOTR01000010 907337..908460 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna866 ID=rna866|Name=XM_015512980.1|organism=Diuraphis noxia|type=mRNA|length=1124bp|location=Sequence derived from alignment at JOTR01000010:907337..908460- (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
TTAACTCGCAAATATTGACCGGATCAACTTCGTCGTCGTTGAGGAACAGA
TTCCGAAATAACAGACATCGCAGTACCGCATATTAGGTACCAGACTCGAT
TCCGTCCGAAAAAACAACCACAGCAGCAAAGCCAAAATGTTTCTGTCGTA
CAGAGTCGTGCCCGTGTTCGTTTTCTCCATACTTTTGAACTTCATCTACG
TGTACTCCAACCAACCTATTTTACCTGCACCATCTCCATCTGTTCAAATT
GGAATAATTAAAAGTGACTTCTTGTCGTGTGACGAATGCATAGGATCGCG
GTGCTACATGAAATTGAATGGACCGTGCATCTCCAACAACGACAAAACAA
AGGACAAACCATCGACTTACTATTGTTTSTTGTGTACAATGGACAATAAT
AACAATCCTCTGTTCTACAGCGAAGATGAATGTAAAAAGGGATGCACGGA
TAACGAGATGACTTGCGCCTGCAACGAGCAGTGTTACTTGTGCGTCAAAA
AAAATGACGACATCTCATCTTTCAAGTGCAACCTGCCCACCAAGATGGCG
AACGATGAATGTAGGTTAGTCAATTATACTTGGACCAGTCAATGACACCG
TGCCGCCATCGTCATGATATTATTTAATATTAATATTAATTAAATAATAT
TAAATTTTTTCAGCTATAATTTTTGTCCTCAGAAAAATTACCCCTCCTTC
CCTCTTACCAATTCATAATATTTTTATAGTATGTGATATACCTATAAGGA
TTCGATCACCGACGCGATGGGTAAATTATTATTTTCACGGTTATACTTCA
CACAATATCCTCGCATAATAAGTAATTCCTCCGCAGCAATCCGTCATCCT
GTTTACCACCATTATCGAGGTGCATAATATTAAATTATTATTATTCTGGT
GCAGTGATGGCGTACACTATACGCGAAGACAACGAACGCCGTGAAACCAC
ACGCCTTCGTGTCATAAGTAATATACATTTAATAAAATAAACGATTTTTA
AACGTCTCTCCCTCCCGATTGGTAATACTATAATATATTGTATAATAGGT
TTTCAATGGTTACCTGTTTCCCGAAAATTTAAAAAAAAAATACAAAAATT
CTTTAAGTTTTTTGTTAGGCAATT back to topprotein sequence of XM_015512980.1 >rna866 ID=rna866|Name=XM_015512980.1|organism=Diuraphis noxia|type=polypeptide|length=153bp
MFLSYRVVPVFVFSILLNFIYVYSNQPILPAPSPSVQIGIIKSDFLSCDE
CIGSRCYMKLNGPCISNNDKTKDKPSTYYCXLCTMDNNNNPLFYSEDECK
KGCTDNEMTCACNEQCYLCVKKNDDISSFKCNLPTKMANDECRLVNYTWT
SQ. back to topmRNA from alignment at JOTR01000010:907337..908460- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna866 ID=rna866|Name=XM_015512980.1|organism=Diuraphis noxia|type=mRNA|length=1124bp|location=Sequence derived from alignment at JOTR01000010:907337..908460- (Diuraphis noxia)
TTAACTCGCAAATATTGACCGGATCAACTTCGTCGTCGTTGAGGAACAGA
TTCCGAAATAACAGACATCGCAGTACCGCATATTAGGTACCAGACTCGAT
TCCGTCCGAAAAAACAACCACAGCAGCAAAGCCAAAATGTTTCTGTCGTA
CAGAGTCGTGCCCGTGTTCGTTTTCTCCATACTTTTGAACTTCATCTACG
TGTACTCCAACCAACCTATTTTACCTGCACCATCTCCATCTGTTCAAATT
GGAATAATTAAAAGTGACTTCTTGTCGTGTGACGAATGCATAGGATCGCG
GTGCTACATGAAATTGAATGGACCGTGCATCTCCAACAACGACAAAACAA
AGGACAAACCATCGACTTACTATTGTTTSTTGTGTACAATGGACAATAAT
AACAATCCTCTGTTCTACAGCGAAGATGAATGTAAAAAGGGATGCACGGA
TAACGAGATGACTTGCGCCTGCAACGAGCAGTGTTACTTGTGCGTCAAAA
AAAATGACGACATCTCATCTTTCAAGTGCAACCTGCCCACCAAGATGGCG
AACGATGAATGTAGGTTAGTCAATTATACTTGGACCAGTCAATGACACCG
TGCCGCCATCGTCATGATATTATTTAATATTAATATTAATTAAATAATAT
TAAATTTTTTCAGCTATAATTTTTGTCCTCAGAAAAATTACCCCTCCTTC
CCTCTTACCAATTCATAATATTTTTATAGTATGTGATATACCTATAAGGA
TTCGATCACCGACGCGATGGGTAAATTATTATTTTCACGGTTATACTTCA
CACAATATCCTCGCATAATAAGTAATTCCTCCGCAGCAATCCGTCATCCT
GTTTACCACCATTATCGAGGTGCATAATATTAAATTATTATTATTCTGGT
GCAGTGATGGCGTACACTATACGCGAAGACAACGAACGCCGTGAAACCAC
ACGCCTTCGTGTCATAAGTAATATACATTTAATAAAATAAACGATTTTTA
AACGTCTCTCCCTCCCGATTGGTAATACTATAATATATTGTATAATAGGT
TTTCAATGGTTACCTGTTTCCCGAAAATTTAAAAAAAAAATACAAAAATT
CTTTAAGTTTTTTGTTAGGCAATT back to topCoding sequence (CDS) from alignment at JOTR01000010:907337..908460- >rna866 ID=rna866|Name=XM_015512980.1|organism=Diuraphis noxia|type=CDS|length=459bp|location=Sequence derived from alignment at JOTR01000010:907337..908460- (Diuraphis noxia)
ATGTTTCTGTCGTACAGAGTCGTGCCCGTGTTCGTTTTCTCCATACTTTT
GAACTTCATCTACGTGTACTCCAACCAACCTATTTTACCTGCACCATCTC
CATCTGTTCAAATTGGAATAATTAAAAGTGACTTCTTGTCGTGTGACGAA
TGCATAGGATCGCGGTGCTACATGAAATTGAATGGACCGTGCATCTCCAA
CAACGACAAAACAAAGGACAAACCATCGACTTACTATTGTTTSTTGTGTA
CAATGGACAATAATAACAATCCTCTGTTCTACAGCGAAGATGAATGTAAA
AAGGGATGCACGGATAACGAGATGACTTGCGCCTGCAACGAGCAGTGTTA
CTTGTGCGTCAAAAAAAATGACGACATCTCATCTTTCAAGTGCAACCTGC
CCACCAAGATGGCGAACGATGAATGTAGGTTAGTCAATTATACTTGGACC
AGTCAATGA back to top
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