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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Gbkey | mRNA |
| Gene | LOC107161873 |
| Model evidence | Supporting evidence includes similarity to: 7 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments |
| Product | tyramine receptor 1-like |
| Transcript id | XM_015508466.1 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GeneID | 107161873 |
| Genbank | XM_015508466.1 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| LOC107161873 | gene3048 | Diuraphis noxia | gene | JOTR01000085 214736..221975 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| XP_015363952.1 | cds4332 | Diuraphis noxia | CDS | JOTR01000085 217559..217619 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >rna4460 ID=rna4460|Name=XM_015508466.1|organism=Diuraphis noxia|type=mRNA|length=1055bp|location=Sequence derived from alignment at JOTR01000085:214736..221975+ (Diuraphis noxia)|Notes=Excludes all bases but those of type(s): exon.
GCAACATTCCGTGTACAATatctttcttttttcttttttttttttctaaa
acaattttttcgctTTCCACGTCTAcccattaacaataattataataata
tacacattatgttTGGTACAATATCCATCGCGTTgtaaatatatctatgt
ataatacataaacaatataatatataatcatcacgacaattacaattatt
attcatctgATCCGCTGCGGCACTTCGACCCCGTCAGCGCGACCGCCATG
TTACCGGAATCTGgCTGTGATGTGTGACAGATAGCAACAATGGCGGTGGG
CACGTACTACTGAAGCCCACCCCCACCACAACCTGGAGCCCTTAACCCAG
GCATCGCTGGTGCTCACCATGGCGGTCGCCATCATCCTCCTTAATATCCT
CATAATCGCTACGTTCACCAACATAagaggtGGAGGAGAGGTGATGAATG
TATACTTGGTGTCACTGGCTCTAGCCGACCTGCTCTACGGTGTGCTCGTA
GTGCCATTTTCCGTGTATCCTGCACTTGTGCAACAATGGGTTTACGGGAA
AATTGCTTGTAGAATAATCGGATACATCGAAGTCGCACTGTGGACCGTGT
CTGCATACACACTTATGTGGATTAGTGTGGACAGGTACATAGCAGTACGT
AAACCGGTCCGGTACTTTACGGTGCAGACGCGCACCAGGTGTCAGTGCTG
GATGGCGTTCACGTGGATATCGTCGGCGATGCTCTGCAGCCCACCGCTGC
TCGAGTTCGGTGATCCGGTATTCGACCAGGACACGGCGGTGTGCATGCTC
GACTGGCAAGGCATGGCGGCATATTCGGTGACGCTGTCCATACTGGTGCT
GGGGCCCAGTCTGATCACAATTCTGTACACGTACGTGTATATTTATGGTG
CGATCAGACGGTTGCGACGTGGCTTTCTAGCACACGACAAgATGAAAATG
GAGATTATATGGCAAAAACACCAAGAATCCATGAAATATGCATTTCTTGT
AGAAAAAGTCAATTATGTGCACATAAtccatgatatatttttaaaatggg
tATAA back to topprotein sequence of XM_015508466.1 >rna4460 ID=rna4460|Name=XM_015508466.1|organism=Diuraphis noxia|type=polypeptide|length=229bp
MAVAIILLNILIIATFTNIRGGGEVMNVYLVSLALADLLYGVLVVPFSVY
PALVQQWVYGKIACRIIGYIEVALWTVSAYTLMWISVDRYIAVRKPVRYF
TVQTRTRCQCWMAFTWISSAMLCSPPLLEFGDPVFDQDTAVCMLDWQGMA
AYSVTLSILVLGPSLITILYTYVYIYGAIRRLRRGFLAHDKMKMEIIWQK
HQESMKYAFLVEKVNYVHIIHDIFLKWV. back to topmRNA from alignment at JOTR01000085:214736..221975+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4460 ID=rna4460|Name=XM_015508466.1|organism=Diuraphis noxia|type=mRNA|length=7240bp|location=Sequence derived from alignment at JOTR01000085:214736..221975+ (Diuraphis noxia)
GCAACATTCCGTGTACAATatctttcttttttcttttttttttttctaaa
acaattttttcgctTTCCACGTCTAcccattaacaataattataataata
tacacattatgttTGGTACAATATCCATCGCGTTgtaaatatatctatgt
ataatacataaacaatataatatataatcatcacgacaattacaattatt
attcatctgATCCGCTGCGGCACTTCGACCCCGTCAGCGCGACCGCCATG
TTACCGGAATCTGgtgagcacacacacacacgcacacgtacacacataca
cacatacactcgtacatacacacacacacgtgcacTCACACAcactaatg
taatataatatagaatatgtaataatatgtatattctatcacgatatata
taacgttatatattatatcgtatacgcCACGGTATTTTTTCAGTTCTTGC
ACTTATCAAACATSATCGTCGTCGTTGCCGTGTAATGATCGTCGTTTCGG
ATTGTAGTCTATTTTTGACgttttatcgtttatttttaatgtttaatatt
attatcgcggtGTAATCGTCGCCCGTTCGTATCACTGGAGAACATTCGCG
TTCGACGATTATTCCGATTTCGTCTCGGGGGTAGGTAAACGCGCGCGCCG
GTCTGGGTCAATTTTTTTYTCGGCTCGCCGTCGTGTCTATAACAGTTGTA
GGTTTGTAGGTATACGCACTGCGCTCGGACCCCACGACGATACCTTCTCG
CGTATCGTAAAcgctgtcgtcgtcgtcgtcgctcTGTCGGGATGGTTCGT
TATcgcagttaataatattattttacgacgATTTACACCACAACGACAGT
TCGGACGATACCTTGGATGTCGGRGTGATATACGTGACGAAAARtgaaat
caaaaaatgttatataacacTGTCAGCGACAGACGACCCACGGGAATACC
GTCTATTACAGTGATAAGTGGTAtcgacgtattattattattgtgacaat
attataacacgtCTCCCAAAAGTCGTAATAACGTTACCTACAYATCATTT
TTACCACAACACTCCACCACCGCCGCTGCAGTCATGTTGTCGCCAATCGT
GCACTTTTCGACTATGGATAACTGGACACGCATACTACATCTGCACTGTC
TACCGCAGGATGCACCGCAACGATGAGCatctactttaaataatataatg
gattcGCAACGGTTCCGATGATGTTTTCCAGAGtaattcgtatatattat
gacatatagtATGCACACTCGCACCATTTAGATTTCCGAAAACCGACCCT
CCATCGTCTCCTCACCGCCATCGCAACGTGAACGGTCAATTTTGGTCGTC
CGTCGATGCTGTAGCGTCTctcttgtttatttattttttcccgaTAGATT
TCTCAAAACATTCAATTGTCATCATGTGTGAGTTCTCTCCCACGATGGAC
ACGGCGGTTCGTTTATGTGCTCAATAGTAACAATAGTTCGAAATGATCGT
AAATCGCGCGTAATCTTATCGCCAAGTCGATCGTATTTTTCGTGTGTTCT
TTATCGCATAAAGCGCTAAACGAGTGGTACGCGAGTGTAGCAAAAGTCTA
ATACCCGTCGTCCTCCGATCGATATGCgtctatgatatatttttttatcg
atgtCGTAATGTATATATCAtgaggtacaatattattacagtagtattaa
tatatagtagtatacagTAGCATAGTAATTATAACTagtgttaatatata
aattattacaatggtGGCAGTAGTATCAGCTAGTATCAAACACAATACAA
TGGTATTTATGATGCATTATCGACTATTAAAGAATTGTAAATTTATGGTT
TGCACTTTTCTCCCGTAAATATGGACGATATTTTGTTAAGTAATaaacta
cattattttttaatttataatatgtaaaatcttATGATTTTGAAATACAT
CCCTAATAAGCCATAATATAACAGCAATGCAATCAATAAGTTGATtttaa
tagctatataatataaagtttttacttACACGTATTTAGTATGCGCTTta
cggttaaaatattttaattttcacagaTTAGCAAAcagataaaaatttga
taaaccgtcaatattgattttcacacctatgaaataaatataacaatagt
tataatagtttttattatttactgacTTTTAAATAgcactatatatagtt
atagtttattctatataaatgtataactgtataagtctattaatattatc
gatTGGACACATTATTAGCGTTGATTTAGAAGCCAttgaatatgttatat
acatacaacatataatacttttatacatatcAAATAGGTAATACGATAAT
AAgaatgtttttaatgaaatcaactttaaaatctaaatgcgtacaataaa
atgtattttgaagaATAAACTacccaataataatagtttggaAAATAAAG
TATtgattaatatctattttagaacattttaaatgGTATTTTCTACGAGT
TTCATGTTTTTGTAAGGgagtgaatattatttatttttgtaactacTTTA
ATCAGATGAATTCATAGTTACCGTCGTCttgttagttttaattaatatat
aatatatataatctagtgcattttatcatattatctaaTTGTGGTTTTAC
CTATAATGTGATAACAaagctatttaaataataatcgtttaatgagacat
ttatatatttatgtgtaggCTGTGATGTGTGACAGATAGCAACAATGGCG
GTGGGCACGTACTACTGAAGCCCACCCCCACCACAACCTGGAGCCCTTAA
CCCAGGCATCGCTGGTGCTCACCATGGCGGTCGCCATCATCCTCCTTAAT
ATCCTCATAATCGCTACGTTCACCAACATAagaggtattattattataag
tgtttaCCATTTATATGAATTACTTACTGACATAATATTGTTGACATCAC
TGAGGTAGTTTAAgacacaatttttcaaaattaaacaaatataaacgagt
tattttaacataatgtaatttccaaaaaaaagtattaagctttttatttg
attaaatccAATTTTTCTAACTACTCACTGtctgtatataatgtaatagg
tGGAGGAGAGGTGATGAATGTATACTTGGTGTCACTGGCTCTAGCCGACC
TGCTCTACGGTGTGCTCGTAGTGCCATTTTCCGTGTATCCTGCACTTGTG
CAACAATGGGTTTACGGGAAAATTGCTTGTAGAATAATCGGATACATCGA
AGTCGCACTGTGGACCGTGTCTGCATACACACTTATGTGGATTAGTGTGG
ACAGGTAatgatttaatgaattttgattttatacaggttataataataaa
taatggttactcagatttaaaagttattgtttCACCGGTAAACCAACAAA
AACTACAAGATTTGTTAATTGAATTGGTtccataaaagttaaaacatttt
attccagacacacaatattaataatggtgTTAAATTGCCTATACATGACG
CCGTCATAAGACATATCGATTGactgcttttaaaaataattatcgagtAC
TggagattattttaaattattaattagttattggCAACttgaactataat
ttaaatttaaatactgcaTTTTTCCCAGACAAAATGAATTTAGTTCCTTA
AATCATAGTTTTAAATGATAATCGCTATAGGCCTAtagtctaatattata
tttctaaaagaGAAATCGTCGAATATTGaactaaaagtttaatatttatt
tataaataatatcccATTATTAcgttatttgaatttgaaataaagAGAGT
TGAAGGACaagttataatacctataggttgatttttattgttgaatttcT
AATTATTCAGCTTTATCAAACTttgtaaatgcttataaaaataataaaaa
ctttgggtttaaaatatatatcaaattatatttgtatattaaattttaaa
atattagctaTTGAATTtagaaagtttaaattaaaatttaatttttttta
aatatatattttattaataggtataaaatccgaaaaaaatactttttatt
tccCCTTTAGGAATAATGTCGTGGTTTAATATATCACCTATCGTCAGctg
atataatgataattttacagTGAGTTTGTAGGCATCTTTATGCTAtacaa
ttgtatacaatattatataggtacctaacataataataaaataatttatg
ttgtaaattgtaaattgttacgatatttatatatgattttaaatgtcTTT
TCCATCGGGTACTGATACGTTCTATTTATTCTATATTCAGTGGTAAAATC
TCAATTGTACCAATTTTGTACGTACGCAAAGAATACGTTCCACGTACTCA
CGCACCTGCACTAGACACTACCCAAACATAACGATTAAATTGTTGTATGT
AAATTGAAGGGAATTCCtcgtatatttgttttaaaaattacttcttagtt
attattttattttatattcaatattatgtaattattaacatttcagACAA
TATgtattgaacattatattatggtttatcaCTATAACTCCAGACACATA
TCATTTCTAGGGTCTAGcacaccattttttttattcttagttCCACTCac
aaaaactgtataatatagttatactatCTACGagggaaatatatatatat
atatatgtataaatatgctGCAGTTTGATTGCATGTCTGAGTCGCGTCTC
GCGTGTTCTGCATTTCTGCACGTTCGTTTTATCGTAGGTATGTGTTTACA
TTCTTCTCGGAAATGACTGCAGCACGGGGAGGGACAAATTATATTCACCA
AAATATAACGCATCAGACATTTTCGTGTGCACAACACCGCATTATGATGC
CatcacataaaaatacaaaatagctTAGTGAGTCATGAAATTATGCAGTG
GTATCATTGTAGTTAACGTGCATCGTATTGTACTAATCCACTTTCCATTT
TtctgattacatttttttcgcTCACGATTGGATATCAATATTTAGTAAGT
TCGAGGTATGACAAAACTCAAGGAGAACATGTTCTGCagaaaaaagtttg
aaatattgaattttaatataatatttcagagGGGGGGGTTCAATCGGGTT
CGAGATTACGACAAATTTAAGAAATCGACGTTCGATACATTAAGAATCta
ttatgtattgatataatGAAAGTTTATTGTactgttaatagttaatataa
tacattcttaCAAACGTAAccaatctaatattatacaacaatgaaGATTT
GATAGGGTTAATTATTAGACAtagcaaattatatattagactTTAATATA
GCGTGATATAATGTACAGTTCTAGAACCACGTctgtttatatttacaata
ataaatgatacgttgaagtataatatatgatataatattattagatgtta
gatattttacaatacatattatacaagatgATGCTTTTATCGCAGAACAC
TCGACATTATTCTgcatataaatctatttaatttacgAGAAGTCATAGAG
ACATAGATTGAAGTGTGCTCGAATCTCGCTCTGGCTGCAATGCACACAAC
AATacgacataatttattttatacacggaCACTACATGAATAAACCCACA
ATGGAATAATACGTGTGCGCGCGCGATGGTTTTTCACAGGTACATAGCAG
TACGTAAACCGGTCCGGTACTTTACGGTGCAGACGCGCACCAGGTGTCAG
TGCTGGATGGCGTTCACGTGGATATCGTCGGCGATGCTCTGCAGCCCACC
GCTGCTCGAGTTCGGTGATCCGGTATTCGACCAGGACACGGCGGTGTGCA
TGCTCGACTGGCAAGGCATGGCGGCATATTCGGTGACGCTGTCCATACTG
GTGCTGGGGCCCAGTCTGATCACAATTCTGTACACGTACGTGTATATTTA
TGGTGCGATCAGACGGTTGCGACGTGGCTTTCTAGCACACGACAAggtac
gacataatattatcatatatcgacgttataaacatatataaattatatat
taagacgatatacctatatacacgcgtacataaaccatataatattatag
acacgtACTGCAGCCCTGAGTACACTTGCAGGACGTTATAGCCGGAGGGT
TtgagtaaataataactatacggACAGTCGTTTAGGAAGGTCTGTGGATA
TATTTCAGACTTGTTAAACATCATCTATACTGAGTGACCCAGAAGYCAAT
ACTTGATTGTGCACTCCcaccaataaaaaattacagCCCTATCTGttata
acgttaaaatattattggttattataacTACACTGTGgattttatatgca
ataaaaccCTCTATCGTATACttatacaaatgtatagaaTAAATGCGTGC
AATATGCAtagataatatcaaaatatgcacCAAAaaggaaatgaaaaaaa
accacTCAATAGTTTGTTTACACCTGCAAACGCAGTACATTCTTACTTAA
TATAAACTCAAACTATccactgaaaataataaaaataataaagttctaAA
ATTCATGCCtgcaaaatgtaatgtatataatataggtactctttTTCTTG
TTTAACTTTTGATCAAATGTAGGTTAAAAACCTGTGTtattgaagcctta
ataaactatatattaaaaaaaagtttgtttacGATTTATATATTCGCTAT
GTACGTCcattcaaaaatttatataaaactagcaggttatttaattatat
taattaaataaaaaataagtgttgtagtaaataataaatattaattgttc
ataaatatGAGTAGGTAAATGACCAGTATTTATAGTTCTCATAGGCCATA
gtcatagtaatatataatcaaGGGAATCAAGCAGCGTTAAGTTATTCATT
ATGAAGGTATGGAATTTGTCTGCTTGAATACAGAAATGAATGATCTAAAT
TATAAGACAGTATTTAAAGTTAGAGGACATGTAACTATAGTTATTGTATG
CGTGCAAACGATTAAACgatgtattgtattaattttatcaaaagcTCGTT
AATAATGATTCACCTATAACtactctctctctcactctctctctctctct
ctatatatatatatataacgataaCTAGATATTCATCCGGGTTAATAGTG
TGAACTATCGAATTCATTTCGTGTAGATGAAAATGGAGATTATATGGCAA
AAACACCAAGAATCCATGAAATATGCATTTCTTGTAGAAAAAGTCAATTA
TGTGCACATAAtccatgatatatttttaaaatgggtATAA back to topCoding sequence (CDS) from alignment at JOTR01000085:214736..221975+ >rna4460 ID=rna4460|Name=XM_015508466.1|organism=Diuraphis noxia|type=CDS|length=687bp|location=Sequence derived from alignment at JOTR01000085:214736..221975+ (Diuraphis noxia)
ATGGCGGTCGCCATCATCCTCCTTAATATCCTCATAATCGCTACGTTCAC
CAACATAagaggtGGAGGAGAGGTGATGAATGTATACTTGGTGTCACTGG
CTCTAGCCGACCTGCTCTACGGTGTGCTCGTAGTGCCATTTTCCGTGTAT
CCTGCACTTGTGCAACAATGGGTTTACGGGAAAATTGCTTGTAGAATAAT
CGGATACATCGAAGTCGCACTGTGGACCGTGTCTGCATACACACTTATGT
GGATTAGTGTGGACAGGTACATAGCAGTACGTAAACCGGTCCGGTACTTT
ACGGTGCAGACGCGCACCAGGTGTCAGTGCTGGATGGCGTTCACGTGGAT
ATCGTCGGCGATGCTCTGCAGCCCACCGCTGCTCGAGTTCGGTGATCCGG
TATTCGACCAGGACACGGCGGTGTGCATGCTCGACTGGCAAGGCATGGCG
GCATATTCGGTGACGCTGTCCATACTGGTGCTGGGGCCCAGTCTGATCAC
AATTCTGTACACGTACGTGTATATTTATGGTGCGATCAGACGGTTGCGAC
GTGGCTTTCTAGCACACGACAAgATGAAAATGGAGATTATATGGCAAAAA
CACCAAGAATCCATGAAATATGCATTTCTTGTAGAAAAAGTCAATTATGT
GCACATAAtccatgatatatttttaaaatgggtATAA back to top
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