SFRICE006492-RA (mRNA) Spodoptera frugiperda rice

You are viewing an mRNA, more information available on the corresponding polypeptide page

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
SFRICE006492	SFRICE006492	Spodoptera frugiperda rice	gene	SFRU_RICE_007965 1..10483 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
SFRICE006492-RA	SFRICE006492-PA	Spodoptera frugiperda rice	polypeptide	SFRU_RICE_007965 1..9335 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
SFRICE006492-RA-exon	SFRICE006492-RA-exon-1	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 1..38 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-2	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 606..748 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-3	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 1107..1259 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-4	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 1548..1741 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-5	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 2097..2294 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-6	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 2763..2962 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-7	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 3582..3754 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-8	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 4459..4685 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-9	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 5139..5289 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-10	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 5929..6055 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-11	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 6314..6417 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-12	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 6701..6818 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-13	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 6945..7184 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-14	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 7399..7585 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-15	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 7886..8058 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-16	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 8452..8551 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-17	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 9019..9159 +
SFRICE006492-RA-exon	SFRICE006492-RA-exon-18	Spodoptera frugiperda rice	exon	SFRU_RICE_007965 9288..10483 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-1	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 1..38 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-2	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 606..748 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-3	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 1107..1259 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-4	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 1548..1741 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-5	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 2097..2294 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-6	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 2763..2962 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-7	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 3582..3754 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-8	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 4459..4685 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-9	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 5139..5289 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-10	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 5929..6055 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-11	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 6314..6417 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-12	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 6701..6818 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-13	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 6945..7184 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-14	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 7399..7585 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-15	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 7886..8058 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-16	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 8452..8551 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-17	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 9019..9159 +
SFRICE006492-RA-CDS	SFRICE006492-RA-CDS-18	Spodoptera frugiperda rice	CDS	SFRU_RICE_007965 9288..9335 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
SFRICE006492-RA-three_prime_UTR	SFRICE006492-RA-three_prime_UTR-37	Spodoptera frugiperda rice	three_prime_UTR	SFRU_RICE_007965 9336..10483 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at SFRU_RICE_007965:1..10483+
coding sequence from alignment at SFRU_RICE_007965:1..10483+

spliced messenger RNA

>SFRICE006492-RA ID=SFRICE006492-RA|Name=SFRICE006492-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=3863bp|location=Sequence derived from alignment at SFRU_RICE_007965:1..10483+ (Spodoptera frugiperda rice)|Notes=Excludes all bases but those of type(s): exon.  
ACGCTCACCGACCTCTCGCTCACTATCAAGCCCGGCAAAATAATAGCGGT
AATCGGTCCGGTAGGCGCGGGGAAGTCGTCCCTACTACACGTGTTACTAC
GCGAGCTCCCTCTGTTGTCGGGCACGGTACATGTCGGCGGTAACGTCTCC
TATGCCAGCCAGGAACCCTGGCTCTTTGCAGGCAGTGTACGTCAGAACAT
ATTGTTTGGGCAGCCAATGGACCGTCCTCGCTACAACACAGTGGTGCGGC
GCTGCGCCCTCGATCGAGACTTCGCCCTCTTTCCACACGGAGACAAGACC
ATCGTCGGCGAGAGGGGCGTCAGTCTTAGTGGAGGACAACGTGCCCGAAT
CTCCCTAGCCCGCGCAGTGTACAAGCGCGCAGACATCTACCTGCTGGACG
ACCCACTGTCGGCCGTGGACGCGCACGTGGGCCGGCACCTGTTCGAGTCC
TGCCTCATCGGGTACCTCCGCAACACCACCCGGATACTCGTCACACACCA
ACTGCAGTTCCTAAGAGACGTCGATCAGATAATAATCCTGAAAAACGGTG
CGATAGCGGCGGCGGGTAACTTCGACACGCTGAGTGCGTCTGGTTTGGAC
TTCGCGACATTGTTAGCTCGCGACCAGGAGGAGGAGAAACCGACGCCGGA
CCCGAACACCACCGACCCTGATACGGACTCTGTATTACAAGGCAGCTTCC
GTAAGCGGCAGATGAGCATACATTCGGTGAGTTCGGTGGACAACCTGACG
GCGACGGCGCCGCCGGCGGGCGAGGCGGAGGCGCGCAGTGCGGGCGCCGT
GGGCGGCCGCGTGTACGCCGCATACCTGCGGGCCGCCGGACACACCGCGC
TCGTACTGCTCATGTTGATGGTCGCTACGTTAGCTCAGCTGCTCGGCTCC
GCCTCCGATTGGTGGACTAGCTACTGGGTAAATCTAGAAGAGTCGCACCC
GGTGCAGACCGTGGCGTCGCTACAGAATACGAACATGAACTCGACAATAG
CGCTGCAGGCTGCGAACAACATCAGTGAAAGGCTCGTGCAGAACGCGTAC
TACGAGTCCGCGGGACTCAGTCGATACGATTGCATCTATATTTATACTGG
CATGGTGATAGCTCTAGTAGTGGTATCGCTGCTCCGATCGTTCATGTTCT
TCACGATGGCGATGCGCGCGTCGACCCGGCTGCACAACAACATGTTCTCG
GCCATCACGCGCGCTCCGATGCGCTTCTTCCACGTCAACCCCTCCGGCAG
GATCCTCAACCGATTCTCCAAGGACATGGGAGCCGTCGATGAAGTCCTGC
CTTCCGCACTGTTGGATGTTTTGCAGATCGGTCTGTCTCTGATCGGTATC
GTAGTAGTGGTGGCGATAGTGAACTACTGGCTGTTGGTGCCGACGGTGGC
CATTGGGTTCGTGTTCTACGGCCTGCGGATATTCTACCTCTCCTCCTCGC
GCAGCATCAAGCGCCTCGAGGGTGTGACTCGCAGTCCGGTATTCTCTCAC
CTGAACGCGTCGCTACAAGGGATCACTACAATTCGCGCCTTCGGGGCTCA
GGAAGCACTTATACGCGAGTTTGATAACCATCAGGATCTACACAGCTCGG
CTTGGTACCTGTTCATTGCTAGCTCCAGAGCGTTCGGTTTCTGGTTGGAC
CTCGTGTGTGTGGTCTACATCGCGATGGTCACGATGAGTTTCCTCGTCTT
TGGACAAAGCGAGTACGGTGGTAACGTGGGTCTAGCCATCACGCAAGCTA
TGGGTCTGACGGGAATGTTCCAGTGGGGCATGCGACAGTCTACCGAGCTG
GAGAATCAGATGACCAGTGTGGAAAGAATACAAGAATATTCAAATATAGA
ATCGGAACCTCCCCTCCAATCCGAACCCGAGAAGAAGCCGCCGCCATCTT
GGCCGGAGGCGGGGCGTATAGAGTTCAAGCATGTGTTCCTGTACTACGCG
CCCTCGGACCCGGCCGTGCTTAACGATCTCAGCTTCGTGGTGCAGCCCAA
GGAGAAAGTCGGCATCGTCGGACGCACTGGTGCTGGAAAGTCTTCGCTCA
TCAATGCACTCTTTAGGTTAGCGACAATAGAAGGCGAGATAATAATCGAC
GGGCGCGAGACGTCCCAGCTCGGGCTGCACGAGCTGCGCAGCCAGCTGTC
CATCATCCCGCAGGAGCCCGTGCTGTTCTCCGGGACCATGCGGCACAACC
TCGACCCCTTCGATGAATACCCCGACCAAGTGCTCTGGAGGGCACTCGAA
GAGGTGGAGTTGAAGGAAGCGGTGACGGAGCTGCCGGCGGGTCTGTCGTC
CCGCATGTCGGAGGGCGGCGGCAACTTCTCGGTGGGCCAGCGGCAGCTCG
TGTGCCTGGCGCGCGCCATCGTGCGCCGGAACAGACTGCTCGTGCTCGAC
GAGGCCACCGCCAACGTCGACCCACAGACTGACGCGCTCATACAGTCTAC
AATTAGAAGTAAATTCGCGGAATGTACCGTGCTCACCATCGCCCATCGAC
TACACACCGTCATGGATTCCGACAAGGTGTTAGTGATGGACGCGGGTCGC
ATGGTGGAGTTCGATCACCCGCACATGTTGCTACAGAACGCGGACGGGAT
CCTGCGCGGCATGGTCGACCAGACCGGCCGCGGCATGGCTGAAACACTCA
GCAGAGTCGCCAAACAGGCGTACGAATCTAAAATGGGGCAGCTACCGGCG
AGTACCTCTGATTGATAATGTTAATCGTTAATCCTAGGCTATGAATTAAT
TGTTCCTACAATCGAGATATTGTACAAAGGATCTGGTGATGATATGCGTG
GTGTGCGCATGCGGTGTAACATCACGGTAATTTCCCATTAAGTGAAATGA
TTACTTTTAATTTGTAAAATATTGTATAGTCAACACTTCCACGGCTAATG
CGCGGCGCGGCCACGCAGCATTACTGCGCCGGTCGCGCGAATATACACAA
ATATTTCACGGTATTATGGCTGGTAACTGCACTCGGCTTTTTATAACGGT
ATTTCCAACGAGTTATTATTGAAAAATGGTTCCGAGTACAACTATTTGCA
GTAATTAGTAACGTGAAACGTTTTTTGCGACATGTACTTAAGGCCCCTCA
CGAATTATGCCGTAATTGCAGCGGTTAGTGTGTGGAGCTATTACAAATTG
CAAGTTAATTGTAACATAACTCGGTAGCACTTAGATTAAAATGTTTTACG
ATGAAGTTGTTCCTAGCGGAGAGCTATTTAGAATTGGAAGTGTTGAACTA
ACTGAGCGTCACAAACTGTATTAGGTATTTTTATAAAGTGAAATATTTTT
AAGGGTATGTTTTAATTTTATGTGACTACTTAGTTTACTAATATGTTTTT
ATAAACGACAAGTGAGATTTACAAGTTTACTTTAGATTGTAACAAATTGC
ATACAGGTGTGTTCGGATCACTCAACTGTTTGTGAACATGTTTGCATACA
ATGCCAAATGTAATCTCGAATACCATTATACATAGATAGATAATTTAACA
AATTAACGGTCCAATAACGTTTCGAGCTTTAACGATGAGTTACGAGGTGC
TATGCAAGCGATCTTGTACTTAATGTAAGTGTTAGTGACGACGACTGACG
ACGTCACCCGTGGCGAGCTCTGTACTTACTTCGAAATCAACCTTGTGAAC
TATATACTGGAGGTACTTAAAGTATCGACACATTAGTGCTTAATTTTGAG
AACTTTTATTGTAAATCACGTAGGTTTTATTTTATAATTAAACGTTATTA
TCCTTAATTTGAATGTGATGAATTAGTGAAACGTAACGAACGCCATTAAA
CGTGTTATGTAAGTAAAGTAAGAACTTGTTACTATTGTTGGTTTATTGCA
ACACAAATAAAAC

protein sequence of SFRICE006492-RA

>SFRICE006492-PA ID=SFRICE006492-PA|Name=SFRICE006492-RA|organism=Spodoptera frugiperda rice|type=polypeptide|length=905bp
TLTDLSLTIKPGKIIAVIGPVGAGKSSLLHVLLRELPLLSGTVHVGGNVS
YASQEPWLFAGSVRQNILFGQPMDRPRYNTVVRRCALDRDFALFPHGDKT
IVGERGVSLSGGQRARISLARAVYKRADIYLLDDPLSAVDAHVGRHLFES
CLIGYLRNTTRILVTHQLQFLRDVDQIIILKNGAIAAAGNFDTLSASGLD
FATLLARDQEEEKPTPDPNTTDPDTDSVLQGSFRKRQMSIHSVSSVDNLT
ATAPPAGEAEARSAGAVGGRVYAAYLRAAGHTALVLLMLMVATLAQLLGS
ASDWWTSYWVNLEESHPVQTVASLQNTNMNSTIALQAANNISERLVQNAY
YESAGLSRYDCIYIYTGMVIALVVVSLLRSFMFFTMAMRASTRLHNNMFS
AITRAPMRFFHVNPSGRILNRFSKDMGAVDEVLPSALLDVLQIGLSLIGI
VVVVAIVNYWLLVPTVAIGFVFYGLRIFYLSSSRSIKRLEGVTRSPVFSH
LNASLQGITTIRAFGAQEALIREFDNHQDLHSSAWYLFIASSRAFGFWLD
LVCVVYIAMVTMSFLVFGQSEYGGNVGLAITQAMGLTGMFQWGMRQSTEL
ENQMTSVERIQEYSNIESEPPLQSEPEKKPPPSWPEAGRIEFKHVFLYYA
PSDPAVLNDLSFVVQPKEKVGIVGRTGAGKSSLINALFRLATIEGEIIID
GRETSQLGLHELRSQLSIIPQEPVLFSGTMRHNLDPFDEYPDQVLWRALE
EVELKEAVTELPAGLSSRMSEGGGNFSVGQRQLVCLARAIVRRNRLLVLD
EATANVDPQTDALIQSTIRSKFAECTVLTIAHRLHTVMDSDKVLVMDAGR
MVEFDHPHMLLQNADGILRGMVDQTGRGMAETLSRVAKQAYESKMGQLPA
STSD.

mRNA from alignment at SFRU_RICE_007965:1..10483+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>SFRICE006492-RA ID=SFRICE006492-RA|Name=SFRICE006492-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=10483bp|location=Sequence derived from alignment at SFRU_RICE_007965:1..10483+ (Spodoptera frugiperda rice)
ACGCTCACCGACCTCTCGCTCACTATCAAGCCCGGCAAGTAAGTAATCAT
TATGTGGTACAAAATTAACTGTATAGACTGCCTCGTTAGTCGAGTGGCCG
AACAAGGGGAACTCGGGTTCGATTCCCGGGTCGGGCAAAGTATTATTGGG
CTTTTTTCGGATTTTCGGGAACATTCTCGGTAAAAGCACGGAGTCTGGAA
ACGTGTCCAGGTTATGGCAACAAGCTCACCCCCTATTACATGGGACTTAT
AACACAAATGGCGAAAAGTGGGTATACATTGCATAGTACCTTTGCCTACC
CCTTCGGGGATAATAGGCGTGACGTTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTTTCGTACTGGTCATTGATAAAATGTAGGTACTACCCGTGA
TGCGATTGCGTATAAAATATGCAATTCGTTACAAAATATACTTTATCGCA
ATATGTATAAGGTGTGTTTTTCTTCGCAATAAGTATCTTGTTTTAATATA
CGCATCTGCTCACTGCAGAGACCTCTTAAATATCTAACAATAAATATTGT
TTTTCTACTTCAACCGATAAATAATATAAATTATACAAATTATAATTTTC
TCCAGAATAATAGCGGTAATCGGTCCGGTAGGCGCGGGGAAGTCGTCCCT
ACTACACGTGTTACTACGCGAGCTCCCTCTGTTGTCGGGCACGGTACATG
TCGGCGGTAACGTCTCCTATGCCAGCCAGGAACCCTGGCTCTTTGCAGGT
AAATTATATTTCATTGTCTTTTAACTTGTTTAAGTTTGTGTTTATTTTGT
GTCAATCTAGGACCAATCAATGTAACATTATAAAGTGCTATCATTCTTGT
AAAACTTTTGCTACATTTTCGTAGTGTGGTCTGATATCTGATATGTGGAT
CAGGCATAATGTTGTTAGGTGTGCAAACCCCCTTATAATGTATTTTTTTT
GGTGTTAAGATTTACTCGTATCTAGAGAAATTAGTTACTTTTACTATATT
TATATATTTTTTTAGTTCATTAGATACACCTTTTGAGCGTCTATTAAAAC
ATTCTTCATAATATGACATGAATATAACATCACTCTACATCTTGTAATTC
CCACAGGCAGTGTACGTCAGAACATATTGTTTGGGCAGCCAATGGACCGT
CCTCGCTACAACACAGTGGTGCGGCGCTGCGCCCTCGATCGAGACTTCGC
CCTCTTTCCACACGGAGACAAGACCATCGTCGGCGAGAGGGGCGTCAGTC
TTAGTGGAGGTAAGCAAATACATATATGTTGAAAATTTACAATTATATAC
TTTTTAGCAAGGAGAAAAGGTTCACTTTTATTTGCAATCTAGATTTGTAA
TGGTAAAATGCTGCCATTGTAAAATCAACTCAAACACCAAAAAATATAGA
GTTCTCATTTCCTTAATCATTAACAGTCACAAGAAGTTCTTATAACAGCT
TTCATCAATCTTCCTCTTCACATATACATATTTAAATATACATCTTCAAG
GTCTGCTTATTATAATAATATAAAACGAATAATACCTTTGTTCCCAGGAC
AACGTGCCCGAATCTCCCTAGCCCGCGCAGTGTACAAGCGCGCAGACATC
TACCTGCTGGACGACCCACTGTCGGCCGTGGACGCGCACGTGGGCCGGCA
CCTGTTCGAGTCCTGCCTCATCGGGTACCTCCGCAACACCACCCGGATAC
TCGTCACACACCAACTGCAGTTCCTAAGAGACGTCGATCAGGTACGAAAA
GGGTTTAATGCTTTCTGTAATGTTCTCGCCATATTCTTAATATTGTATAG
TATCAGGACCATATTTATAAACCCCGGTCTGTCCTGAAAGTAGTCGGACA
ATCTCGAATAGTTGTTATAAGTTAGCGGTAAATATTGCCTCGCGTTCAGA
AAGTGGAAAGTATTATCATAAATCAAAAATGTCCTTTGAAGTAAATTACG
TATAGTTATCCAGCTCAATATAATTCCTTCTATATAGCTTCAGTAGTGAT
TACCATTCTGAAAGACACTACGTTGCCATAAAGGACACAAAATACCTGTG
TAATTACTAACTGACAATTAAAAACTCTTTAATATTCTTTCAACAGATAA
TAATCCTGAAAAACGGTGCGATAGCGGCGGCGGGTAACTTCGACACGCTG
AGTGCGTCTGGTTTGGACTTCGCGACATTGTTAGCTCGCGACCAGGAGGA
GGAGAAACCGACGCCGGACCCGAACACCACCGACCCTGATACGGACTCTG
TATTACAAGGCAGCTTCCGTAAGCGGCAGATGAGCATACATTCGGTGAGA
TACATACTTAATTGCTATCGTTTACAAATTGCGGCTATATAACATTTTTT
CTATGTATGGTATTCGACGAATGAGCACATTTTTACACCTGTTGGTAAGC
ATAGCAGGCAAGGAAAGCAACACATTTCACGCAGGTTTTCTGCGTGTGAT
TGTGATATCATTGCCGTCAAGCCGGCTCATTCGTACCAAAACATAGCACG
TGAAGAAACTACAAACTTATTCTTACACTACGATGATTTTGATAGATTTA
TGCCCGAATAGTGAAATGCTACTCAATTTTAAGTTGTAATTAAATATTGT
GCTATCTCTGTCATTTTATAAAGAATTGATAGGGACAGAACTAGTTTTGA
GAGCTAGTAGAGTTAGTTAAAATTGAGTTTGAGTATTCGGACATTAGTCT
TATTCTATAATACGATGATTTTGATAGATTTAGTGAATAAGAGTGCATGT
TGTCGTGTATAGGTGAGTTCGGTGGACAACCTGACGGCGACGGCGCCGCC
GGCGGGCGAGGCGGAGGCGCGCAGTGCGGGCGCCGTGGGCGGCCGCGTGT
ACGCCGCATACCTGCGGGCCGCCGGACACACCGCGCTCGTACTGCTCATG
TTGATGGTCGCTACGTTAGCTCAGCTGCTCGGCTCCGCCTCCGATTGGTG
GACTAGCTACTGGTACGTTACATTTATTTTATTTACTTTTACTATAACCC
TTTTTTGAGTGGGAAAATTATCGAATATCTCCTCTTATCCTGAGGTAGTG
TCAGACTGTTACTGACTAACTACCTCGTTCTAACTCCTGCTAGGAGTCAG
TCAGTCAGTCAGTCAGGAGCCACGATAACTCCTTGCAACTCTCCGCAGCC
CTGGTCGGGATTTGCTTTATTCTCAAAATAGTTATTTCACGTACAAATTA
TACCCAAACAGTTATATTCAATTAAACAGACAATTAGGACGAGCGATTTA
CAACATACTTTTAATTTTACCTCTCTAATAATCTATATTGATTATATTTA
GTACTTACTATATGTTCAAACTCAATGGGTGGTAGGCAACCCACTGACTC
GCAGCTGTCAACAACTATACGCCATGTAACTTGTGTTGTTTGTGTTGTAC
ACGATGTTACGTGAACAACAAATATTCGAACTTAAGTCCAAGTGCAATAT
CAAAGTATTGTACATGATGTTTAAAAAGTTTTCTTTTTGGGTAAAAGTTT
ATAGTAAAAATCAATTTAACGTCCCAAAATCTCGTGTTTATAATAATGCA
CTACCACAATTAACACCTACTTCCATTACAGGGTAAATCTAGAAGAGTCG
CACCCGGTGCAGACCGTGGCGTCGCTACAGAATACGAACATGAACTCGAC
AATAGCGCTGCAGGCTGCGAACAACATCAGTGAAAGGCTCGTGCAGAACG
CGTACTACGAGTCCGCGGGACTCAGTCGATACGATTGCATCTATATTTAT
ACTGGTAAGTGGTTTCAAATACTGTACTTTACTTTTGTACTTAGTTTTCA
ACAATCCCATGTGATTGGTTGGTTTATTTGAGCCTCGCGCTCTCGATTCA
TTTACATTCAGCGTAAAGCAAACACGTACTAAGGGAGTCCGATATACGAT
GTTTAGTTATTTATATCTATTCAGATACAAATGTATAGAGATACGCACCA
TATTGTTGTTATGATTCATTATTTTATAAATAATATAACTACAGTAGAAC
TCCAATTATCCGAACTCCGACTATCCGAATCGCCGATTATCCGAATCTCA
AAAATTGTCCAAAAAAGTCTAAGTGCGCTATTATTCTCCCCCCCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCAATTTTTTTTTAAAAAATCCGATTATCCGAATATTTGATT
ATCCGAATGGGTCCCGGTCCCCATTAATTCGGATAATTGGAGTTCTACTG
TAGTATTTTATATACGAATTCGGTTTTGTAAAACCTCTTGAAATTAATTA
CTTAATTCATTATAATCCATATAACCATTTTGACAACACTACTTACTATA
ACCATTTCGTACGTAAGACTTAATAAGTGAATTATATTTATTCTCTTACT
CACTAACGGTAACTGTTTGACCTTCATCACGTATTCACGTACTTGTATGA
TCCCACAGGCATGGTGATAGCTCTAGTAGTGGTATCGCTGCTCCGATCGT
TCATGTTCTTCACGATGGCGATGCGCGCGTCGACCCGGCTGCACAACAAC
ATGTTCTCGGCCATCACGCGCGCTCCGATGCGCTTCTTCCACGTCAACCC
CTCCGGCAGGATCCTCAACCGATTCTCCAAGGACATGGGAGCCGTCGATG
AAGTCCTGCCTTCCGCACTGTTGGATGTTTTGCAGGTATATGTTCATTTG
TTATCATTCATATTATTTTACATATGTCAATAAATTGGGTAAGGGCTCAG
GTACACTTTGTGATTAATGATGATGGATGTGTGAAATGTGTATTTTGATG
TTCAGTTGTTCGATACCTTGGATTTGGTTGAATGGGATTCATCCCAGTAG
AGGATTTTTAAATCCATAGATTGTCTGAAAGTTAAGTGAAATTGTATTAC
AGAAAGAATAGTAGCCCAATCAAACTAAAGACTATGTTAGGAGAATGACA
TCTGAACACGATAAGCTAATTAAAACTTTTTATTTTTCAAATAAACATGT
TATGGCCAGTTCTAATAATTTTCTTATCTGTAGATTTACTAACTAGAGAT
ATAATTGTATATCAAATATACAAATAGCTATAATTAAAACCTTCAAATGC
TAATGATAATTTAAATAAAATGTCCTATTTACTTTCAGATCGGTCTGTCT
CTGATCGGTATCGTAGTAGTGGTGGCGATAGTGAACTACTGGCTGTTGGT
GCCGACGGTGGCCATTGGGTTCGTGTTCTACGGCCTGCGGATATTCTACC
TCTCCTCCTCGCGCAGCATCAAGCGCCTCGAGGGTGTGAGTGAGTCATCT
CTGACGCATAATGCGACCATTTCTTTAGATTTAGACTAATCTTTCAGTGT
AATGCACCCGTTTATTTACATTTTTGGGGCCTGTTTCATCACGTCCATAT
AAGTACTAGATAAACCTATGTGACAGGTGACAGATAGTTCACACAAATTA
CGTTTTTATCCCGCCGTATGCCAGAACACAGATCCACGCGAGACACAATG
TATTTTCTATTGTGTCTTATTTACTGACAATTAAACTGTTAATTCTAAAT
TATTTGGATTCATAATTGCTAACCAGAGGTTATGAAACATGCCCTTAACT
TTCATCTAGTAAAAAATAGTACATACGTGCTAGTAGCTCTATGCCTAGAA
ACTACATTGTGGTTTGCAATTTCTATCTGTTAACCATAGGACAAGACCAT
TTGACTTGTAAAAAATCTCATCTCATTTATTGTAAATCTTTTATTTTACA
CTTTCATATACATAATCATCATACCGAATATTTTTTAAAACGAAACGGTT
CTGTTATCTAAACAACTGGCAAAATTTGAGTGTTAAATAATACATGTTTC
TGTATTACTTTTTGGGAATAAAACGTTTAAATATTCCTTTACTACGACTA
TAATACAGTGAGTGGTATCTGCCAACAGCTCGCAGTCCGGTATTCTCTCA
CCTGAACGCGTCGCTACAAGGGATCACTACAATTCGCGCCTTCGGGGCTC
AGGAAGCACTTATACGCGAGTTTGATAACCATCAGGATCTACACAGCTCG
GCTTGGTAAGACAATAGTATATGTATGTATGTATTACTTGTCCATAAACC
TTTTTTATAATTACTATCATGAGACAAACTAATATATAGCTATAACTAGT
ATAGCTTTGCTCCATTAATAATACGTGTGTAAACCGTGAGTTAGTTAATT
TAATTTCCATATATCATTGATTTTATTTGAACAATGATCTAAACATTAAC
TTAGGTGCTAATATTGAAATCTTCACCTTTAAAACACTACTAAATTGTAT
ATTGTTGTTGCAGGTACCTGTTCATTGCTAGCTCCAGAGCGTTCGGTTTC
TGGTTGGACCTCGTGTGTGTGGTCTACATCGCGATGGTCACGATGAGTTT
CCTCGTCTTTGGACAAAGTAAGTTATTAAACAAGTATTGTCGCGGTTTCT
TCTTACCATTTTTACATGTCGTCACAAATAATACTTCAAATTAAAAAAAA
AAAAAAAAAACATAACCCTCCTTCTGGCGCAGTCGGGTAACAATAGAGGT
ACAAAACTGTTTACCACACAGATTTTAAATAAATCACTCTTCTCATTTCT
ATATTGTACTATATTATTCTCATTTCTAATTATTGTACAATACGATATCG
GTATTTTTAATCATTTACCTAAGCAATAATACTATTATTTTCTCCAACAG
GCGAGTACGGTGGTAACGTGGGTCTAGCCATCACGCAAGCTATGGGTCTG
ACGGGAATGTTCCAGTGGGGCATGCGACAGTCTACCGAGCTGGAGAATCA
GATGACCAGTGTGGAAAGGTAACTTCAGTTTAACATAGAATATGACATAA
TTATGGCTTGTTTAGAGGCTAGTCTAAGTGCATCTAACAATAGTAAAAAA
GTTGGTGTCTTATGAAAAACTTATCATTGTTTTTTTTATTACAGAATACA
AGAATATTCAAATATAGAATCGGAACCTCCCCTCCAATCCGAACCCGAGA
AGAAGCCGCCGCCATCTTGGCCGGAGGCGGGGCGTATAGAGTTCAAGCAT
GTGTTCCTGTACTACGCGCCCTCGGACCCGGCCGTGCTTAACGATCTCAG
CTTCGTGGTGCAGCCCAAGGAGAAAGTCGGCATCGTCGGACGCACTGGTG
CTGGAAAGTCTTCGCTCATCAATGCACTCTTTAGGTACGTTATAAACATC
TGATGTATATTAATTACCTCAACTGTAGTATTAACTTTACTGCCGAGGTC
TTGCGGCTAATCTCTGTATCAACAGATTAATGATTAGGTAATCAAAAACA
ACTCTATACCATTATCAGGAATTTTAGTGAAATATTCTAGAATCTATCTC
ATTGTCATCATCAACATTGTAACCTTCAAAAGTAAAAATAACCACCAGGT
TAGCGACAATAGAAGGCGAGATAATAATCGACGGGCGCGAGACGTCCCAG
CTCGGGCTGCACGAGCTGCGCAGCCAGCTGTCCATCATCCCGCAGGAGCC
CGTGCTGTTCTCCGGGACCATGCGGCACAACCTCGACCCCTTCGATGAAT
ACCCCGACCAAGTGCTCTGGAGGGCACTCGAAGAGGTAACTTTTATTATT
ACCGTCTTTAAAATTAAAAGTAGATGTTGAAACACCGAAGACATATTAAT
TAATTTACTTACTCAGTTTCTATAAAAAACTGAATTTATAATTATTCTTG
TAATGTGTGATATTTATTTACTTAATATAAGTAATCGGTTTATTTACTTA
ACATAATCGGTAAAGATTTCGAAATAAAGGATAATTTAGGTTAAAATGTT
AATGTTTCATTTTATACTTACGGTATTACTTACACCTTGCCATTATTCAG
TAATTTACATCAGATGTATATCTGTGTTTCTGCAGGTGGAGTTGAAGGAA
GCGGTGACGGAGCTGCCGGCGGGTCTGTCGTCCCGCATGTCGGAGGGCGG
CGGCAACTTCTCGGTGGGCCAGCGGCAGCTCGTGTGCCTGGCGCGCGCCA
TCGTGCGCCGGAACAGACTGCTCGTGCTCGACGAGGCCACCGCCAACGTC
GACCCACAGTACGTATACACCATACTTTTATTACGAATATGTTTGACAAA
TATATCTCTTTGTTTGTTTATTGTGAGAGAGCAATCGAATGTTATGTATT
TATTTTCTCCAATGAGACGTATTAAAATGATAGTAATTCGTTTATTATCT
AGCTTTTTTTGGATCTAGGTTTTACGTATTTGTATAGTAATCAATTACCA
AAAAAAAACAACAATTTATGTACAACTCAGAAAAGAGCATCAATATTTCA
TCCCTTTTTTATTTAAGTACAGTTTTTATGCAATTACTCGGCACACAATT
AACATTCCCCCTTATTTGGAGTACACGAGAATTATAAATTTACAACATAA
CTAGAATGAAAGAGCTGTAAAGGAAAGTCATAAATATTTTCTGTATTCCA
GGACTGACGCGCTCATACAGTCTACAATTAGAAGTAAATTCGCGGAATGT
ACCGTGCTCACCATCGCCCATCGACTACACACCGTCATGGATTCCGACAA
GGTGAGAATATTTACCATTTTAGCACGAAACTTTTATACATAGTGTGCAT
ACTTGTTAGGTGTAACATAGGTAAAATGCATGCTTACTATGTGGAACATA
TTAATAAGATACTGTTGGTATGAGCACGCAACTCCGTGTGTGATCCACAA
ATTGTTATTTCGGGTCTGGGTGTCATATGTATCTGAAGTTGTATGTTTGT
AAACGCACCCATGGCAAAAGAGAAAATTCTGGTGTTGGGCTACGTTTGAA
AAAGCCCTTTACTACCTATTAGGGCTGTTATAAAAATTAATTTAGGATAT
TCGTGGACCATTATTGTCGTAATTTTATGCAATATTATTTGTGTGTTTTG
TTGCTTTCAAATCTGGTTATAAGAAAATCTTAAATAAGGATGTTTAATTC
GACATACATAATTACATATTAAATACTTACAATACAAATACAAATAATAA
ATATGAACGTATGTACAGGTGTTAGTGATGGACGCGGGTCGCATGGTGGA
GTTCGATCACCCGCACATGTTGCTACAGAACGCGGACGGGATCCTGCGCG
GCATGGTCGACCAGACCGGCCGCGGCATGGCTGAAACACTCAGCAGAGTC
GCCAAACAGGTAGCTACATGTTTTTTTAATCATTACACGGTTTTTCTTCC
CTCCATTATTAATTAATGGGAATGTATGACAGATGGGATGCCCTTTTACG
GACCAGTTTACTAATGAGGTATTAATTCATTTTGCAGGCGTACGAATCTA
AAATGGGGCAGCTACCGGCGAGTACCTCTGATTGATAATGTTAATCGTTA
ATCCTAGGCTATGAATTAATTGTTCCTACAATCGAGATATTGTACAAAGG
ATCTGGTGATGATATGCGTGGTGTGCGCATGCGGTGTAACATCACGGTAA
TTTCCCATTAAGTGAAATGATTACTTTTAATTTGTAAAATATTGTATAGT
CAACACTTCCACGGCTAATGCGCGGCGCGGCCACGCAGCATTACTGCGCC
GGTCGCGCGAATATACACAAATATTTCACGGTATTATGGCTGGTAACTGC
ACTCGGCTTTTTATAACGGTATTTCCAACGAGTTATTATTGAAAAATGGT
TCCGAGTACAACTATTTGCAGTAATTAGTAACGTGAAACGTTTTTTGCGA
CATGTACTTAAGGCCCCTCACGAATTATGCCGTAATTGCAGCGGTTAGTG
TGTGGAGCTATTACAAATTGCAAGTTAATTGTAACATAACTCGGTAGCAC
TTAGATTAAAATGTTTTACGATGAAGTTGTTCCTAGCGGAGAGCTATTTA
GAATTGGAAGTGTTGAACTAACTGAGCGTCACAAACTGTATTAGGTATTT
TTATAAAGTGAAATATTTTTAAGGGTATGTTTTAATTTTATGTGACTACT
TAGTTTACTAATATGTTTTTATAAACGACAAGTGAGATTTACAAGTTTAC
TTTAGATTGTAACAAATTGCATACAGGTGTGTTCGGATCACTCAACTGTT
TGTGAACATGTTTGCATACAATGCCAAATGTAATCTCGAATACCATTATA
CATAGATAGATAATTTAACAAATTAACGGTCCAATAACGTTTCGAGCTTT
AACGATGAGTTACGAGGTGCTATGCAAGCGATCTTGTACTTAATGTAAGT
GTTAGTGACGACGACTGACGACGTCACCCGTGGCGAGCTCTGTACTTACT
TCGAAATCAACCTTGTGAACTATATACTGGAGGTACTTAAAGTATCGACA
CATTAGTGCTTAATTTTGAGAACTTTTATTGTAAATCACGTAGGTTTTAT
TTTATAATTAAACGTTATTATCCTTAATTTGAATGTGATGAATTAGTGAA
ACGTAACGAACGCCATTAAACGTGTTATGTAAGTAAAGTAAGAACTTGTT
ACTATTGTTGGTTTATTGCAACACAAATAAAAC

Coding sequence (CDS) from alignment at SFRU_RICE_007965:1..10483+

>SFRICE006492-RA ID=SFRICE006492-RA|Name=SFRICE006492-RA|organism=Spodoptera frugiperda rice|type=CDS|length=2715bp|location=Sequence derived from alignment at SFRU_RICE_007965:1..10483+ (Spodoptera frugiperda rice)
ACGCTCACCGACCTCTCGCTCACTATCAAGCCCGGCAAAATAATAGCGGT
AATCGGTCCGGTAGGCGCGGGGAAGTCGTCCCTACTACACGTGTTACTAC
GCGAGCTCCCTCTGTTGTCGGGCACGGTACATGTCGGCGGTAACGTCTCC
TATGCCAGCCAGGAACCCTGGCTCTTTGCAGGCAGTGTACGTCAGAACAT
ATTGTTTGGGCAGCCAATGGACCGTCCTCGCTACAACACAGTGGTGCGGC
GCTGCGCCCTCGATCGAGACTTCGCCCTCTTTCCACACGGAGACAAGACC
ATCGTCGGCGAGAGGGGCGTCAGTCTTAGTGGAGGACAACGTGCCCGAAT
CTCCCTAGCCCGCGCAGTGTACAAGCGCGCAGACATCTACCTGCTGGACG
ACCCACTGTCGGCCGTGGACGCGCACGTGGGCCGGCACCTGTTCGAGTCC
TGCCTCATCGGGTACCTCCGCAACACCACCCGGATACTCGTCACACACCA
ACTGCAGTTCCTAAGAGACGTCGATCAGATAATAATCCTGAAAAACGGTG
CGATAGCGGCGGCGGGTAACTTCGACACGCTGAGTGCGTCTGGTTTGGAC
TTCGCGACATTGTTAGCTCGCGACCAGGAGGAGGAGAAACCGACGCCGGA
CCCGAACACCACCGACCCTGATACGGACTCTGTATTACAAGGCAGCTTCC
GTAAGCGGCAGATGAGCATACATTCGGTGAGTTCGGTGGACAACCTGACG
GCGACGGCGCCGCCGGCGGGCGAGGCGGAGGCGCGCAGTGCGGGCGCCGT
GGGCGGCCGCGTGTACGCCGCATACCTGCGGGCCGCCGGACACACCGCGC
TCGTACTGCTCATGTTGATGGTCGCTACGTTAGCTCAGCTGCTCGGCTCC
GCCTCCGATTGGTGGACTAGCTACTGGGTAAATCTAGAAGAGTCGCACCC
GGTGCAGACCGTGGCGTCGCTACAGAATACGAACATGAACTCGACAATAG
CGCTGCAGGCTGCGAACAACATCAGTGAAAGGCTCGTGCAGAACGCGTAC
TACGAGTCCGCGGGACTCAGTCGATACGATTGCATCTATATTTATACTGG
CATGGTGATAGCTCTAGTAGTGGTATCGCTGCTCCGATCGTTCATGTTCT
TCACGATGGCGATGCGCGCGTCGACCCGGCTGCACAACAACATGTTCTCG
GCCATCACGCGCGCTCCGATGCGCTTCTTCCACGTCAACCCCTCCGGCAG
GATCCTCAACCGATTCTCCAAGGACATGGGAGCCGTCGATGAAGTCCTGC
CTTCCGCACTGTTGGATGTTTTGCAGATCGGTCTGTCTCTGATCGGTATC
GTAGTAGTGGTGGCGATAGTGAACTACTGGCTGTTGGTGCCGACGGTGGC
CATTGGGTTCGTGTTCTACGGCCTGCGGATATTCTACCTCTCCTCCTCGC
GCAGCATCAAGCGCCTCGAGGGTGTGACTCGCAGTCCGGTATTCTCTCAC
CTGAACGCGTCGCTACAAGGGATCACTACAATTCGCGCCTTCGGGGCTCA
GGAAGCACTTATACGCGAGTTTGATAACCATCAGGATCTACACAGCTCGG
CTTGGTACCTGTTCATTGCTAGCTCCAGAGCGTTCGGTTTCTGGTTGGAC
CTCGTGTGTGTGGTCTACATCGCGATGGTCACGATGAGTTTCCTCGTCTT
TGGACAAAGCGAGTACGGTGGTAACGTGGGTCTAGCCATCACGCAAGCTA
TGGGTCTGACGGGAATGTTCCAGTGGGGCATGCGACAGTCTACCGAGCTG
GAGAATCAGATGACCAGTGTGGAAAGAATACAAGAATATTCAAATATAGA
ATCGGAACCTCCCCTCCAATCCGAACCCGAGAAGAAGCCGCCGCCATCTT
GGCCGGAGGCGGGGCGTATAGAGTTCAAGCATGTGTTCCTGTACTACGCG
CCCTCGGACCCGGCCGTGCTTAACGATCTCAGCTTCGTGGTGCAGCCCAA
GGAGAAAGTCGGCATCGTCGGACGCACTGGTGCTGGAAAGTCTTCGCTCA
TCAATGCACTCTTTAGGTTAGCGACAATAGAAGGCGAGATAATAATCGAC
GGGCGCGAGACGTCCCAGCTCGGGCTGCACGAGCTGCGCAGCCAGCTGTC
CATCATCCCGCAGGAGCCCGTGCTGTTCTCCGGGACCATGCGGCACAACC
TCGACCCCTTCGATGAATACCCCGACCAAGTGCTCTGGAGGGCACTCGAA
GAGGTGGAGTTGAAGGAAGCGGTGACGGAGCTGCCGGCGGGTCTGTCGTC
CCGCATGTCGGAGGGCGGCGGCAACTTCTCGGTGGGCCAGCGGCAGCTCG
TGTGCCTGGCGCGCGCCATCGTGCGCCGGAACAGACTGCTCGTGCTCGAC
GAGGCCACCGCCAACGTCGACCCACAGACTGACGCGCTCATACAGTCTAC
AATTAGAAGTAAATTCGCGGAATGTACCGTGCTCACCATCGCCCATCGAC
TACACACCGTCATGGATTCCGACAAGGTGTTAGTGATGGACGCGGGTCGC
ATGGTGGAGTTCGATCACCCGCACATGTTGCTACAGAACGCGGACGGGAT
CCTGCGCGGCATGGTCGACCAGACCGGCCGCGGCATGGCTGAAACACTCA
GCAGAGTCGCCAAACAGGCGTACGAATCTAAAATGGGGCAGCTACCGGCG
AGTACCTCTGATTGA

Synonyms

The feature 'SFRICE006492-RA' has the following synonyms


Synonym
SFRICE006492-PA
SFRICE006492
maker-SFRU_RICE_007965-augustus-gene-0.20-mRNA-1