SFRICE030757-PA (polypeptide) Spodoptera frugiperda rice

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: InterProScan on rice OGS2.3
Date Performed: 2019-07-12
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POSITION
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LKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQSSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSDMHRENMKKARREMEAASMDAASDLLDTDSNTTFAMKPLVRGGVVESKMRQCEIHINPPRKNCCRLWMSKFPTRSKRIDVISRITFPLVFALFNLAYWSTYLFRDEDEEK.20406080100120140160180200Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = 60.72Score = 60.02Score = 54.75Score = 54.57Expect = 2.0E-29 / Score = 103.3Score = Score = Score = SequenceCoilTRANSMEMBRANENON_CYTOPLASMIC_DOMAINTRANSMEMBRANETRANSMEMBRANECYTOPLASMIC_DOMAINNON_CYTOPLASMIC_DOMAINCYTOPLASMIC_DOMAINTMhelixTMhelixTMhelixPR00253PF02932PTHR18945PTHR18945:SF754SSF90112
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 181..203
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaPRINTSPR00253GABAARECEPTRcoord: 14..34
score: 60.72
coord: 182..202
score: 54.57
coord: 74..95
score: 54.75
coord: 40..61
score: 60.02
IPR006029Neurotransmitter-gated ion-channel transmembrane domainPFAMPF02932Neur_chan_membcoord: 18..118
e-value: 2.0E-29
score: 103.3
IPR006201Neurotransmitter-gated ion-channelPANTHERPTHR18945NEUROTRANSMITTER GATED ION CHANNELcoord: 5..204
IPR015680Glutamate-Gated Chloride ChannelPANTHERPTHR18945:SF754GLUTAMATE-GATED CHLORIDE CHANNEL ALPHAcoord: 5..204
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilySUPERFAMILY90112Neurotransmitter-gated ion-channel transmembrane porecoord: 13..204