GSSPFG00025266001-PA (polypeptide) Spodoptera frugiperda corn

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGSSPFG00025266001-RA
Unique NameGSSPFG00025266001-PA
Typepolypeptide
OrganismSpodoptera frugiperda corn (Fall armyworm - corn variant)
Sequence length227
Homology
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1274105175|ref|XP_022817133.1| (fibrohexamerin-like [Spodoptera litura])

HSP 1 Score: 366.7 bits (940), Expect = 6.900e-98
Identity = 177/220 (80.45%), Postives = 192/220 (87.27%), Query Frame = 0
Query:    1 MAKEIIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCKQPL 221
            MA+ I I+FLAIAFSAVQA+II PCP L+H+CI +VLASNSGCD NVMGFIAN+Y V EF FET YFN SYIDRGLIVRNHDKC IS FF+NT T  AVLGMTCR+LELESDRVLIQHRTFQEDT YNYHIHATYP++  T  L   TNM+LCTSH +TDVVTLPIMHIDPKD+PTEKFLTRDLTALNIFEREAF+YTGDLLAKVYID TTCYYNC Q L
Sbjct:    1 MARHIFILFLAIAFSAVQAKIIRPCPNLTHRCIREVLASNSGCDRNVMGFIANKYTVNEFRFETPYFNSSYIDRGLIVRNHDKCYISEFFFNTDTDRAVLGMTCRDLELESDRVLIQHRTFQEDTYYNYHIHATYPMLRFTWTLSPRTNMNLCTSHVYTDVVTLPIMHIDPKDKPTEKFLTRDLTALNIFEREAFFYTGDLLAKVYIDTTTCYYNCNQKL 220          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1247035335|gb|PCG71139.1| (hypothetical protein B5V51_2202 [Heliothis virescens])

HSP 1 Score: 291.2 bits (744), Expect = 3.700e-75
Identity = 144/227 (63.44%), Postives = 171/227 (75.33%), Query Frame = 0
Query:    1 MAKEIIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNC-KQPLHHSTAV 227
            MA   +I  +AIAFSAVQAEI+ PC    + CI K LA+NS C+ +V G + ++YNV EF FET YFN SYID+ LIVRNHDKC +S FF+NTVT  AVL + C  L+LESDRVLIQHR+ QED+ YNYHI ATYPLI ITVNLP  T+MDLC +H FTDV  LP MHIDPKD+PT+ FL+RDLT LNIFERE FYY GD LAK+++DA  C Y C +Q L H + V
Sbjct:    1 MAIFFVIFSVAIAFSAVQAEIVRPCKLTDYSCIGKNLAANSDCNKDVSGALPSKYNVPEFRFETPYFNSSYIDQNLIVRNHDKCFVSEFFFNTVTNKAVLAIDCPKLDLESDRVLIQHRSLQEDSYYNYHIRATYPLIRITVNLPSRTHMDLCRAHVFTDVTALPYMHIDPKDKPTKNFLSRDLTLLNIFEREWFYYGGDNLAKIFVDAHVCDYGCNRQMLPHYSNV 227          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1199373370|ref|XP_021180832.1| (fibrohexamerin-like isoform X1 [Helicoverpa armigera] >gi|1402425153|gb|PZC84878.1| hypothetical protein B5X24_HaOG203868 [Helicoverpa armigera])

HSP 1 Score: 290.0 bits (741), Expect = 8.200e-75
Identity = 141/220 (64.09%), Postives = 166/220 (75.45%), Query Frame = 0
Query:    1 MAKEIIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCKQPL 221
            MAK ++I  LA+ FSAVQAEI+ PC    + CI K LA+NS C   V G +  +YNV EF FET YFN SYIDR LIVRNHDKC +S FF+NT+T  AVL + C  L+LESDRVLIQHR+ QEDTSYNYHI ATYPLI ITVNLP  T+MDLC +H FTDV  LP MHI+PKD+PT+ +L+RDLT LNIFERE FYY GD LAK++IDA  C Y C + +
Sbjct:    1 MAKVLVIFSLAV-FSAVQAEIVRPCKLSDYSCIGKNLAANSNCQPAVSGALPGKYNVDEFRFETPYFNSSYIDRNLIVRNHDKCFVSEFFFNTITNKAVLAIDCPKLDLESDRVLIQHRSLQEDTSYNYHIRATYPLIRITVNLPSRTHMDLCRAHVFTDVTALPYMHINPKDKPTKNYLSRDLTLLNIFEREWFYYGGDNLAKIFIDALVCDYGCNRQI 219          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1199373372|ref|XP_021180833.1| (fibrohexamerin-like isoform X2 [Helicoverpa armigera])

HSP 1 Score: 266.2 bits (679), Expect = 1.300e-67
Identity = 128/217 (58.99%), Postives = 160/217 (73.73%), Query Frame = 0
Query:    1 MAKEIIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCK 218
            MAK ++I  LA+ FSAVQAEI+ PC    + CI K LA+NS C   V G +  +YNV EF FET YFN SYIDR LIVRNHDKC +S FF+NT+T  AVL + C  L+LESDRVLIQHR+ QEDTSYNYHI ATYPLI ITVNLP  T+MDLC +H FTDV  LP MHI+PKD+ T  FL++DL+ ++I+ERE F++ G  L +++++   C Y C+
Sbjct:    1 MAKVLVIFSLAV-FSAVQAEIVRPCKLSDYSCIGKNLAANSNCQPAVSGALPGKYNVDEFRFETPYFNSSYIDRNLIVRNHDKCFVSEFFFNTITNKAVLAIDCPKLDLESDRVLIQHRSLQEDTSYNYHIRATYPLIRITVNLPSRTHMDLCRAHVFTDVTALPYMHINPKDKRTRNFLSQDLSWMDIYERENFFFRGFPLMRIFVNKLICNYRCR 216          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1486903087|ref|XP_026483868.1| (fibrohexamerin-like [Vanessa tameamea])

HSP 1 Score: 211.8 bits (538), Expect = 2.800e-51
Identity = 98/216 (45.37%), Postives = 137/216 (63.43%), Query Frame = 0
Query:    1 MAKEIIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNC 217
            + K + ++    A  AV + I  PC    ++C+   LA+NS C+ NV GF+  +Y +  F F+T YFN +YID  L++RNH+ C +S FF+N  +  AVL + C +L+ ES R LIQH +FQEDT+YNY     YPL+ +TVNLP +  +DLC+S  F DV  LPI  I+P D  TE FL  DLT LNI+ERE F+Y  + LA+ YI++  C + C
Sbjct:    2 LTKAVTLLLTVAACVAVPSNIARPCRVKDNKCVRDNLAANSRCNPNVRGFLPAEYTINSFKFDTPYFNATYIDNNLVIRNHNSCFVSEFFFNVDSDAAVLTIDCPDLDFESTRTLIQHSSFQEDTTYNYSYRGRYPLVRLTVNLPHANALDLCSSFTFADVTELPIFLINPNDEKTENFLATDLTLLNIYERETFFYRANQLARYYINSLICNFGC 217          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1496581284|ref|XP_026753430.1| (fibrohexamerin-like [Galleria mellonella])

HSP 1 Score: 206.8 bits (525), Expect = 9.100e-50
Identity = 96/213 (45.07%), Postives = 137/213 (64.32%), Query Frame = 0
Query:    5 IIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCK 218
            I  + +A+  +     ++ PC     +CI   +++NS C+ NV G I ++Y +  F+FET +FN SYID  LI+RN+D CR+S FF+N     +VL + C NL+LESDR LIQH + QEDT+YNYHI   YPLI +T NL  +  ++LC +  + DV  LPI  IDPKDRPT  FL+RDL+ LNI+ERE F Y    L + ++++  C + C+
Sbjct:    6 IFALTVALCEAGPANNVVRPCRLDDLKCIRDNISANSNCNANVRGSIPSEYVIPRFNFETPFFNASYIDNNLIIRNNDACRVSEFFFNVKADTSVLSVDCPNLDLESDRTLIQHASLQEDTTYNYHIRGIYPLIRLTTNLLNADRLNLCNAFTYADVTALPIFKIDPKDRPTANFLSRDLSLLNIYERETFAYRPPQLIRQFVNSLICDFGCQ 218          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|260766696|gb|ACX50393.1| (silk protein P25 [Corcyra cephalonica])

HSP 1 Score: 206.5 bits (524), Expect = 1.200e-49
Identity = 92/207 (44.44%), Postives = 132/207 (63.77%), Query Frame = 0
Query:   11 AIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCK 218
            A+  + V  +++ PC     +CI+  +++NS C TNV G I  +Y +  F FET +FN SYID  LI+RN D C +S FF+N     +VL + C  L+ ESDR LIQH + +ED+ YNYHI   YPL+ +T NL  +  +DLC+++ F DV  LPI  +DPKD+PT  FL+RDL+ LNI+ERE F Y    L + ++++  C + CK
Sbjct:   12 ALCSAGVPNKVVRPCKFTDLKCITDNISANSHCKTNVRGSIPAKYTIPRFTFETPFFNSSYIDNNLIIRNSDACHVSEFFFNVKADTSVLSVDCPXLDFESDRTLIQHTSMKEDSKYNYHIRGVYPLVRLTTNLLHADKLDLCSAYTFADVTALPIFKVDPKDKPTANFLSRDLSVLNIYERETFAYRAPQLMRQFVNSLICDFGCK 218          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1496575591|ref|XP_026750282.1| (fibrohexamerin [Galleria mellonella])

HSP 1 Score: 206.1 bits (523), Expect = 1.500e-49
Identity = 95/213 (44.60%), Postives = 137/213 (64.32%), Query Frame = 0
Query:    5 IIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCK 218
            I  + +A+  +     ++ PC     +CI   +++NS C+ NV G I ++Y +  F+FET +FN SYID  LI+RN+D CR+S FF+N     +VL + C NL+LESDR LIQH + QE+T+YNYHI   YPLI +T NL  +  ++LC +  + DV  LPI  IDPKDRPT  FL+RDL+ LNI+ERE F Y    L + ++++  C + C+
Sbjct:    6 IFALTVALCEAGPANNVVRPCRLDDLKCIRDNISANSNCNANVRGSIPSEYVIPRFNFETPFFNASYIDNNLIIRNNDACRVSEFFFNVKADTSVLAVDCPNLDLESDRTLIQHASLQEETTYNYHIRGIYPLIRLTTNLLNADRLNLCNAFTYADVTALPIFKIDPKDRPTANFLSRDLSLLNIYERETFAYRAPQLIRQFVNSLICDFGCQ 218          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|9087198|sp|O62605.1|SI25_GALME (RecName: Full=Fibrohexamerin; AltName: Full=25 kDa silk glycoprotein; AltName: Full=p25; Flags: Precursor >gi|3064124|gb|AAC38994.1| low molecular weight silk protein [Galleria mellonella] >gi|3150435|gb|AAC17486.1| P25 [Galleria mellonella])

HSP 1 Score: 205.3 bits (521), Expect = 2.600e-49
Identity = 95/213 (44.60%), Postives = 137/213 (64.32%), Query Frame = 0
Query:    5 IIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNCK 218
            I  + +A+  +     ++ PC     +CI   +++NS C+ NV G I ++Y +  F+FET +FN SYID  LI+RN+D CR+S FF+N     +VL + C NL+LESDR LIQH + QE+T+YNYHI   YPLI +T NL  +  ++LC +  + DV  LPI  IDPKDRPT  FL+RDL+ LNI+ERE F Y    L + ++++  C + C+
Sbjct:    6 IFALTVALCEAGPANNVVRPCRLDDLKCIRDNISANSNCNANVRGSIPSEYVIPRFNFETPFFNASYIDNNLIIRNNDACRVSEFFFNVKADTSVLAVDCPNLDLESDRTLIQHASLQEETTYNYHIRGIYPLIRLTTNLLNADRLNLCNAFTYADVTALPIFKIDPKDRPTANFLSRDLSLLNIYERETFAYRPPQLIRQFVNSLICDFGCQ 218          
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Match: gi|1549094812|gb|RVE49720.1| (hypothetical protein evm_005590 [Chilo suppressalis])

HSP 1 Score: 204.9 bits (520), Expect = 3.500e-49
Identity = 102/215 (47.44%), Postives = 136/215 (63.26%), Query Frame = 0
Query:    3 KEIIIVFLAI-AFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGFIANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVLGMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNMDLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGDLLAKVYIDATTCYYNC 217
            K  +++ LA+    A +A II PC     +CI+  L +NS C   V GF+ NQY +    FE  +FN S+IDR L +RNHDKCRIS F+YN  T   VL + C NL LES+R LIQHR+ QED+ YNYHI  TYPLI +T ++  +  +DLC+S  F DV  LPI  I+P D+ T+ FL+RDLT LN+FERE  +Y    L   +I++  C + C
Sbjct:    4 KSFLLLCLALNVCLAGKAGIIRPCRFYDRKCIADNLKANSRCTPIVRGFVPNQYTIRNVRFEAPFFNASFIDRSLTIRNHDKCRISEFYYNVPTDSLVLSVDCPNLVLESNRTLIQHRSKQEDSCYNYHICGTYPLIRLTAHIRDADKLDLCSSFVFGDVTELPIFAINPLDKKTQNFLSRDLTLLNVFERECIFYRAHFLMCYFINSLYCNFGC 218          
The following BLAST results are available for this feature:
BLAST of GSSPFG00025266001-RA vs. GenBank_protein
Analysis Date: 2019-07-12 (Diamond: corn OGS2.2 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
gi|1274105175|ref|XP_022817133.1|6.900e-9880.45fibrohexamerin-like [Spodoptera litura][more]
gi|1247035335|gb|PCG71139.1|3.700e-7563.44hypothetical protein B5V51_2202 [Heliothis viresce... [more]
gi|1199373370|ref|XP_021180832.1|8.200e-7564.09fibrohexamerin-like isoform X1 [Helicoverpa armige... [more]
gi|1199373372|ref|XP_021180833.1|1.300e-6758.99fibrohexamerin-like isoform X2 [Helicoverpa armige... [more]
gi|1486903087|ref|XP_026483868.1|2.800e-5145.37fibrohexamerin-like [Vanessa tameamea][more]
gi|1496581284|ref|XP_026753430.1|9.100e-5045.07fibrohexamerin-like [Galleria mellonella][more]
gi|260766696|gb|ACX50393.1|1.200e-4944.44silk protein P25 [Corcyra cephalonica][more]
gi|1496575591|ref|XP_026750282.1|1.500e-4944.60fibrohexamerin [Galleria mellonella][more]
gi|9087198|sp|O62605.1|SI25_GALME2.600e-4944.60RecName: Full=Fibrohexamerin; AltName: Full=25 kDa... [more]
gi|1549094812|gb|RVE49720.1|3.500e-4947.44hypothetical protein evm_005590 [Chilo suppressali... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
molecular_function GO:0005198 structural molecule activity
InterPro
Analysis Name: InterProScan on corn OGS2.2
Date Performed: 2019-07-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009911Fibroin P25PFAMPF07294Fibroin_P25coord: 21..216
e-value: 6.2E-63
score: 212.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..226
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.853

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_104contigscaffold_104:996..4414 +    View in Apollo
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond: corn OGS2.2 vs NR2019-07-12
InterProScan on corn OGS2.22019-07-12
Spodoptera frugiperda corn annotation OGS2.22015-12-04
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
GSSPFG00025266001-RAGSSPFG00025266001-RASpodoptera frugiperda cornmRNAscaffold_104 933..4908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>GSSPFG00025266001-PA ID=GSSPFG00025266001-PA|Name=GSSPFG00025266001-RA|organism=Spodoptera frugiperda corn|type=polypeptide|length=227bp
MAKEIIIVFLAIAFSAVQAEIIYPCPRLSHQCISKVLASNSGCDTNVMGF
IANQYNVTEFHFETAYFNCSYIDRGLIVRNHDKCRISRFFYNTVTKVAVL
GMTCRNLELESDRVLIQHRTFQEDTSYNYHIHATYPLIHITVNLPKSTNM
DLCTSHAFTDVVTLPIMHIDPKDRPTEKFLTRDLTALNIFEREAFYYTGD
LLAKVYIDATTCYYNCKQPLHHSTAV.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
Vocabulary: INTERPRO
TermDefinition
IPR009911Fibroin_P25