SFRICE022307-RA (mRNA) Spodoptera frugiperda rice

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameSFRICE022307-RA
Unique NameSFRICE022307-RA
TypemRNA
OrganismSpodoptera frugiperda rice (Fall armyworm - rice variant)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
SFRU_RICE_015326contigSFRU_RICE_015326:4314..10616 -    View in Apollo
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Spodoptera frugiperda rice annotation OGS2.32015-12-04
Properties
Property NameValue
Full nameSFRICE022307
eAED0.18
QI0|0.44|0.3|1|0.88|0.8|10|39|1043
AED0.18
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
SFRICE022307SFRICE022307Spodoptera frugiperda ricegeneSFRU_RICE_015326 4314..10616 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE022307-RASFRICE022307-PASpodoptera frugiperda ricepolypeptideSFRU_RICE_015326 4353..10616 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE022307-RA-exonSFRICE022307-RA-exon-10Spodoptera frugiperda riceexonSFRU_RICE_015326 4314..4527 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-9Spodoptera frugiperda riceexonSFRU_RICE_015326 4709..4954 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-8Spodoptera frugiperda riceexonSFRU_RICE_015326 5045..5752 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-7Spodoptera frugiperda riceexonSFRU_RICE_015326 5820..6040 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-6Spodoptera frugiperda riceexonSFRU_RICE_015326 6159..6305 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-5Spodoptera frugiperda riceexonSFRU_RICE_015326 8048..8207 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-4Spodoptera frugiperda riceexonSFRU_RICE_015326 8304..9107 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-3Spodoptera frugiperda riceexonSFRU_RICE_015326 9372..9572 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-2Spodoptera frugiperda riceexonSFRU_RICE_015326 9728..10035 -
SFRICE022307-RA-exonSFRICE022307-RA-exon-1Spodoptera frugiperda riceexonSFRU_RICE_015326 10455..10616 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE022307-RA-three_prime_UTRSFRICE022307-RA-three_prime_UTR-21Spodoptera frugiperda ricethree_prime_UTRSFRU_RICE_015326 4314..4352 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-10Spodoptera frugiperda riceCDSSFRU_RICE_015326 4353..4527 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-9Spodoptera frugiperda riceCDSSFRU_RICE_015326 4709..4954 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-8Spodoptera frugiperda riceCDSSFRU_RICE_015326 5045..5752 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-7Spodoptera frugiperda riceCDSSFRU_RICE_015326 5820..6040 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-6Spodoptera frugiperda riceCDSSFRU_RICE_015326 6159..6305 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-5Spodoptera frugiperda riceCDSSFRU_RICE_015326 8048..8207 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-4Spodoptera frugiperda riceCDSSFRU_RICE_015326 8304..9107 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-3Spodoptera frugiperda riceCDSSFRU_RICE_015326 9372..9572 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-2Spodoptera frugiperda riceCDSSFRU_RICE_015326 9728..10035 -
SFRICE022307-RA-CDSSFRICE022307-RA-CDS-1Spodoptera frugiperda riceCDSSFRU_RICE_015326 10455..10616 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>SFRICE022307-RA ID=SFRICE022307-RA|Name=SFRICE022307-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=3171bp|location=Sequence derived from alignment at SFRU_RICE_015326:4314..10616- (Spodoptera frugiperda rice)|Notes=Excludes all bases but those of type(s): exon.  
TGCACTGCACACGTGTTCCCCGCGGAGCGATGTCGCGTGCGCGCGTTCCT
CGAGTCTGGGACCGTGTGTGGGGTGGAACGCCTGGCCGACGGAGACGTCA
AGTACGCCAGCTTCCGAGGAGTGCCTTACGCTAAGCAACCACTGGGAGAA
CTCAGGTTTAAGGAGTTGGAGCCTGCGGAGCCTTGGGACTATCACTTCGC
GACGGACGAGGGCCCGGTGTGCTACCAGCACGACGTCCTGTACGGGCGGC
TCATGCGGCCGCAGGGCATGAGCGAGTCCTGCATCCACGCCAACATCCAC
GTCCCCATGGAAGCGCTCCCGGACCAACATCCTGACGTCACGCTGCCCGG
CCTGCCGATCCTCGTGTTCATACATGGAGGAGGATTCGGATTCGGTTCTG
GTGATGCAGATCTACATGGGCCGGAGTATCTCGTCGGCAAGAAAGTCATC
GTCATCACGTTTAATTACAGGTTAAACGTGTTCGGCTTCTTATCAATGAA
CACGACCGCGATCCCCGGCAACGGTGGTCTGCGGGACCAGGTGACACTGC
TGCGCTGGGTGCAGAGGAACGCGAGGGCCTTCGGAGGGGACCCCACAGAC
GTGACGTTGGCCGGCCAGAGCGCCGGAGCCGTGGCCGCACATCTACTTAG
TTTATCCCCAGCGGCTGAGGGAGCTATATTAATGAGCGGAACAGCCACGA
GTCCCTTCTACAGCGCCTCTCCTGCGTATGCGCAACTAGTTAGAAACATG
TATTTGCAATTCTTGGGCATCACCTCGACTGACCCAGAGGACATCCAACG
CCAGCTCATCGAGCTACCCGCCGAGCGACTGAACGCCGCTCACACCAAAC
TTATAGATCAAATGGGACTAGTGACCTTCGGGCCCACCGTGGAGTCACCC
CTGCCGGGAGTTACCACCATCATCGATGACGACCCAGAGGCCCTGCTTAA
TAAAGGGCGAGGGAAAAATATTCCTCTCATAGTGGGCTACACGAATTCTG
AATGTGAAACCTTCCGCAATCGATTTGAAGCATTTGATCTTATCAAGAAG
ATTGCATCGCAGAGTATTCTTGTAGTTCCACCGAAATTGTTGTTCGCAAC
ACCACAGGAATCGTTGTCCAACTTGGTATCAAGAATGTTCGGAAGATATT
TTAACGGAAAAATTAATATGGATGGCTTTGTAAAATCGTGTTCCGAGGGC
TTCTATGAGTATCCCGCGTTAAAGCTGGCACAAAAACGTGCAGAACTTGA
TGGCACGCCCGTGTACCTGTACCAGTTCACGTTTGACAGTCCGACCAGCG
TCATCAAGGAGGTCATGGGCTTAAGTTACCAAGGAGCAGCTCATATCGAA
GATCTGACCTACGTGTTCAAAGCAAACTCGGTGCTTGAGGGACGGGAAGG
GGCCGCGCAGAGCTTAGAAGATTTGCGAATGAAGAATTTCATGACGGACT
TGATTGTCCAGTTCATGTCCTGCAGTAAACCGATTTGCGACGACAAGCAG
TCTTTATGGCCGGAGGACAATGGCAATCAAATCGAGGTGATAGAAGCTCC
CGGCGTGCTGCGGACCAACAGCAGGTCGCCGAGCCAGCTGGACGTGCTGG
ACTTCTTCGACAGCTTGCACAGCAGAGTCAACGCGCTGATAGTGTTATTA
CAAGTGGTGGTGACTGGACAGAATGTCATCCACCTGGCCCAGGGCAGGCT
GCGAGGGGTCACCAAGGATGGATACGTGTCCTACACTGGGATACCTTATG
CAAGTATTACAGGCACTCAGGGGAGATTCAAGAGAGCAGGGATTGCTCCG
CTGTGGCCTGACATCAGAAACTCCAGGACCTCAACCTGTTCGTTAGTGTC
GGATGCGGAGCCCTGTCTGCAGCTAGATGTCCACGTACCGTCTGCAGTGG
GCGGGAATTGGCCCGTGCTGGTGTGGGTGACGGGGGGCAGCGGCCCCTAC
AGCCCCGGCAGGATGGTGCACGAGGGGATCATCGTGGTCGTTGTACATCA
CAGGCTGGGGCCATCAGGCTTTTTATGTTTACGAGACGAGAATATTCCTG
GTAACGCAGGAGTGAAAGACGCGGTTTTAGCATTACGATGGGTGCGCGAT
AATATAATTGCTTTCAAAGGAAACGCAGCCAAAGTCGTTGTAGCTGGGCA
AAGCTTCGGCGCGGCCATGGTGGAAGCCATACTACTGTCAAATATGGCCC
GTGGACTATACCACGGTGCTATATTGCAGAGCGGGAGTGCACTATGCCCT
TGGTCTTTCAACTATGATGCGGAGAAACGCGCCATGGCTTTGGATAATGT
GAGCGAGACGAAAAATGAGTTAGTGAAATCCTTACTGGATACCGAAACTG
AGGACTTGGTGGCGAGAGGCAACAAACTAAATGTTCCTTATTTCCCATTC
GGAATGTGCGTCGAAAAGGCATCAAAGAAAGAAGAGAGGCTGATGTTCGA
AGCGCCGCACGATGTACTGGCGAGGAAGAAGAATGACACGGTGCCCATGA
TCATTGGATATAATAACAACGAAGCATACGTGTTCGTGTCCATGCTGAGG
GAGGCTAATGTGTTGAGAAGAATTTCCAAATCTGTCACTTTCCTGTTACC
AGACGATTTAAAGTTTTTAAATGAAAGAGAACGGAAACAAACTGGTAGAC
TTATAAAGGATATGTATTTCAAGAACAATTTGACAATGGCTGCAGTGTTG
GCGTATCACAGGGACGCCTACTTCTCCAGCCACATCCACCGCAGCGTGCG
TCACCATGCGGCTACTGCGTCTGTCTTCTACTACCAGTTCTCATACTCCG
GTGACTTGGGGATTCAGGCAGAGCCTGGAGTACCGAAGAGAGGTGCAGCG
CATTCAGATGAACTGGCCTACTTGTTCTTTGATGGAAATCTTGAAAGAGA
AGAAGGAACTGTGCAGAGGCGCGTCATCAAACTATGGACGAACTTTGTGA
AACATTTGAACCCGTCAGCCCAGAGCGATGTAAAGTGGGAGCCTACACAG
CCTGATACATACCGCCTGCTGGACATTGGCACCGAACTGTCGATGATAGA
CTACCCTCATTCGAAGACATCGTACCTCTGGGATGAGATCTATGAGAAGT
ACTACTACACAAGGAACAGGATTTCTAATTAAATATAGTTGTTCATTGTG
CATTTTTATTTAAAAATGGAT
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protein sequence of SFRICE022307-RA

>SFRICE022307-PA ID=SFRICE022307-PA|Name=SFRICE022307-RA|organism=Spodoptera frugiperda rice|type=polypeptide|length=1044bp
CTAHVFPAERCRVRAFLESGTVCGVERLADGDVKYASFRGVPYAKQPLGE
LRFKELEPAEPWDYHFATDEGPVCYQHDVLYGRLMRPQGMSESCIHANIH
VPMEALPDQHPDVTLPGLPILVFIHGGGFGFGSGDADLHGPEYLVGKKVI
VITFNYRLNVFGFLSMNTTAIPGNGGLRDQVTLLRWVQRNARAFGGDPTD
VTLAGQSAGAVAAHLLSLSPAAEGAILMSGTATSPFYSASPAYAQLVRNM
YLQFLGITSTDPEDIQRQLIELPAERLNAAHTKLIDQMGLVTFGPTVESP
LPGVTTIIDDDPEALLNKGRGKNIPLIVGYTNSECETFRNRFEAFDLIKK
IASQSILVVPPKLLFATPQESLSNLVSRMFGRYFNGKINMDGFVKSCSEG
FYEYPALKLAQKRAELDGTPVYLYQFTFDSPTSVIKEVMGLSYQGAAHIE
DLTYVFKANSVLEGREGAAQSLEDLRMKNFMTDLIVQFMSCSKPICDDKQ
SLWPEDNGNQIEVIEAPGVLRTNSRSPSQLDVLDFFDSLHSRVNALIVLL
QVVVTGQNVIHLAQGRLRGVTKDGYVSYTGIPYASITGTQGRFKRAGIAP
LWPDIRNSRTSTCSLVSDAEPCLQLDVHVPSAVGGNWPVLVWVTGGSGPY
SPGRMVHEGIIVVVVHHRLGPSGFLCLRDENIPGNAGVKDAVLALRWVRD
NIIAFKGNAAKVVVAGQSFGAAMVEAILLSNMARGLYHGAILQSGSALCP
WSFNYDAEKRAMALDNVSETKNELVKSLLDTETEDLVARGNKLNVPYFPF
GMCVEKASKKEERLMFEAPHDVLARKKNDTVPMIIGYNNNEAYVFVSMLR
EANVLRRISKSVTFLLPDDLKFLNERERKQTGRLIKDMYFKNNLTMAAVL
AYHRDAYFSSHIHRSVRHHAATASVFYYQFSYSGDLGIQAEPGVPKRGAA
HSDELAYLFFDGNLEREEGTVQRRVIKLWTNFVKHLNPSAQSDVKWEPTQ
PDTYRLLDIGTELSMIDYPHSKTSYLWDEIYEKYYYTRNRISN.
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mRNA from alignment at SFRU_RICE_015326:4314..10616-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>SFRICE022307-RA ID=SFRICE022307-RA|Name=SFRICE022307-RA|organism=Spodoptera frugiperda rice|type=mRNA|length=6303bp|location=Sequence derived from alignment at SFRU_RICE_015326:4314..10616- (Spodoptera frugiperda rice)
TGCACTGCACACGTGTTCCCCGCGGAGCGATGTCGCGTGCGCGCGTTCCT
CGAGTCTGGGACCGTGTGTGGGGTGGAACGCCTGGCCGACGGAGACGTCA
AGTACGCCAGCTTCCGAGGAGTGCCTTACGCTAAGCAACCACTGGGAGAA
CTCAGGTTTAAGGTAAATACATTGTGTACTTACTAGTTATGCTTGTATTT
CAAGATAACGAGTCATTAATTTGTAAACATGACAGATTAATGCAGTAATA
GTGCAGTTTTTATCGCCTCCAAAAAAGGAGGAGGTACTTTTCCCTTTTTT
TTGGTTTTATTGTTTGAAGTCGGTTTTTACACATTAAACATTACATTAAT
ATTATATTATTGTTTTAAGAATTCATACTAATGTTAAAAAATCCACGCTA
ATCGATTTGGATGAAGTTAGGAGCAAGATGTACAGGACGCTTTGGGATTG
TTATCATTTCTGAAGCGGACGGTGGCCGAAGCGGACTTAACATTAGTTCC
ATACAATGTAAAAACGCCTCGAAACTTCACATCGGACAAAGGTTATTTTC
ATATGATCTATTAGAAACATATGTATTGTAGGAGTTGGAGCCTGCGGAGC
CTTGGGACTATCACTTCGCGACGGACGAGGGCCCGGTGTGCTACCAGCAC
GACGTCCTGTACGGGCGGCTCATGCGGCCGCAGGGCATGAGCGAGTCCTG
CATCCACGCCAACATCCACGTCCCCATGGAAGCGCTCCCGGACCAACATC
CTGACGTCACGCTGCCCGGCCTGCCGATCCTCGTGTTCATACATGGAGGA
GGATTCGGATTCGGTTCTGGTGATGCAGATCTACATGGGCCGGAGTATCT
CGTCGGCAAGAAAGTCATCGTCATCACGTTTAATTACAGGTATATTAACA
TTTTCATATAGAGTAACTGCGTCTGCTTCCCGATATTATTTATAATTCTA
TGTACAAATACACTGTAGCTCCCTGTAAATGTAACGACGAGGCCACATAT
ATGCCCACACAGGCATTGTATCAATCAACTGTTTCACGTTTCAGGTTAAA
CGTGTTCGGCTTCTTATCAATGAACACGACCGCGATCCCCGGCAACGGTG
GTCTGCGGGACCAGGTGACACTGCTGCGCTGGGTGCAGAGGAACGCGAGG
GCCTTCGGAGGGGACCCCACAGACGTGACGTTGGCCGGCCAGAGCGCCGG
AGCCGTGGCCGCACATCTACTTAGTTTATCCCCAGCGGCTGAGGGGTTAT
TTAGAAGGTAGCCTTCCATTCTGTACTTATGCGATACTATTACACTAGTG
TTTGGTCCAGCTACATTAGTAGCTAGTGTGCAGCGTATCGAGCAATCGTA
ATCTTCACGAAATTTTACATACATAGTCGGAATTACTGAGGACATTGGTT
AAGACTGAGCAATGGAGTAAAAGTTTGTTTGTTAAACATACAATAATTGT
CTTAACTGTGAAGCGAATAGCAACAGAAGTTACAATGTCGACTCATTGTC
TGATTTCAGAGCTATATTAATGAGCGGAACAGCCACGAGTCCCTTCTACA
GCGCCTCTCCTGCGTATGCGCAACTAGTTAGAAACATGTATTTGCAATTC
TTGGGCATCACCTCGACTGACCCAGAGGACATCCAACGCCAGCTCATCGA
GCTACCCGCCGAGCGACTGAACGCCGCTCACACCAAACTTATAGATCAAA
TGGGACTAGTGACCTTCGGGCCCACCGTGGAGTCACCCCTGCCGGGAGTT
ACCACCATCATCGATGACGACCCAGAGGCCCTGCTTAATAAAGGGCGAGG
GAAAAATATTCCTCTCATAGTGGGCTACACGAATTCTGAATGTGAAACCT
TCCGCAATCGATTTGAAGCATTTGATCTTATCAAGAAGATTGCATCGCAG
AGTATTCTTGTAGTTCCACCGAAATTGTTGTTCGCAACACCACAGGAATC
GTTGTCCAACTTGGTATCAAGAATGTTCGGAAGATATTTTAACGGAAAAA
TTAATATGGATGGCTTTGTAAAATCGTGTTCCGAGGGCTTCTATGAGTAT
CCCGCGTTAAAGCTGGCACAAAAACGTGCAGAACTTGATGGCACGCCCGT
GTACCTGTACCAGTTCACGTTTGACAGTCCGACCAGCGTCATCAAGGAGG
TCATGGGCTTAAGTTACCAAGGAGCAGCTCATATCGAAGATCTGACCTAC
GTGTTCAAAGCAAACTCGGTGCTTGAGGGACGGGAAGGGGCCGCGCAGAG
CTTAGAAGATTTGCGAATGAAGAATTTCATGACGGACTTGATTGTCCAGT
TCATGTCCTGCAGGTAACCTAGACATTTGTCATTCATACAGTAAAATAAT
CACAATAATTTTTATTCCCTAGGGATCACTATAATGAAAAATAATACTTT
CTGCTACAGTAAACCGATTTGCGACGACAAGCAGTCTTTATGGCCGGAGG
ACAATGGCAATCAAATCGAGGTGATAGAAGCTCCCGGCGTGCTGCGGACC
AACAGCAGGTCGCCGAGCCAGCTGGACGTGCTGGACTTCTTCGACAGCTT
GCACAGCAGAGTCAACGCGGTATGAGACTGACCCGGCGCCGCACGGAGCG
TTGTGTTTGGTCAAAGACTCTGGTACAGCCGTTGGTGCGACAGTTTGCTA
TAATTTATTTAGGTTAAGTTTAATGTCACAAGTCTAGTCGGTAACTCACG
TAATTTCTTGCCTTCGACTCAGTTTTAATGTTGCTTTTTTATTACTACAA
GTGATAAGTTTCATATGTTTTTAAAGCAGACAATGTTTTATTGAAAGTTT
AATGACGACGAACGAAGGACGACTGTCCAAATGTTGTCGTATTTTTCAAA
TGACTCGTGGGTGGGACAAAATGAGATTTGTTTGATTTCCCATACATTAC
TACCTCGAGGTTTTATATAACTTGTGTGAGCTATTACTTAGATCTTAAGA
GAAATCAGATTTTATTTTTGTTAAACTACAAGTAATTGTGGTTTGTTGTA
TTGTAGTGAGATGAGTGAGAGAATATGTTTTTTATCAATTGCGACACAGA
CTTAGGATATTTTTGTAGAATTTAATATTTTCACAACATGAACAATAAAC
GAAACATGACAACTAATGTAATAATGTTAGTAGTAGCTACTCTAGAGTTA
TGATCTTGCAATTTGTATTTTAAGATGAGTTAGATGATTAGATCTTTGTG
AAAATATGTTTGTACAGATCATTAGTAATACGACACAGAAATACTAAAAC
TTGCACTACAGATACTGATTTCATAAATATAACAAGGATCATGTGTTGTT
TCCTGGAAGTGGTTTGTTGTGGGAAACGTTTCGAATCAGTTCTTCCTTAT
AAATCTTAAACACATACAACTAGAAATGTAATACAAAAAAAACGTAGTTT
AACAAACAGTTAGCAAGTTACAAGTTGACTGATGATGTGTGCTTTAGTAT
TTCTGTGTTGCAAGCGAAGTAATGACACAATGAAGCGACTGATGTAACGT
ATTATTATTTAAGTGTACTTTTAGTGAATCACAACACATTGTAAATATTT
CACTTTCTAATGTAATTCGTGTCTTCCCGTGCGAGCCGCTATGAGTACAA
TGATGCACACGGTCGCATGCTGAACGATTTAATAAAATAATTGCGACGGG
CGGATATACATATTGCATTTTTATTATCCCACTGTACCAAGCAGAACAAG
AGGGTCATGTTTCCCCTGGATTGCAAATTAAAATTATAGATTTGAATTAG
CATAATTCTTATGAACCAAATTCCTTTCTTGGTTCGATCTTTTTGCATCC
CAAACATTTTGTTACCAAGTTTTTGGAAATACCACTGAATTTTAAATAAT
GACAGCTCAGTGACACACTTTGATGTTTTACAATGTATCATCTAAAATTA
ATAAACTATAAATTTAGCATCCCGACTTATTAACCTTTGGTAAGGCTCGG
TATGGAACGCAGATCCACGCGAGACCTAATGTGTTTCTTATTGTGTTTTA
TATACCGGCGACGATCTACGAGAGGTTAATCTACTAGTGCCTGCCCTATA
CGAGTACCTTATTAGAGTGCGTGTCAACTGTAGATGATAATCGGGAGAGT
AACGCACTGGACATAATGGCCACAACATTACCATATTGAATATCACACAT
AATACACGCATTGTGTGTAAATACTGGAGTTCCCCAGTGTTGCGCGTGGC
AGTGCAGCAGACTGCATTTTAAAACTACAGCTGACACACGCTACTAGTCA
CTAGACAACCTGTATTCCGTCTGGGTGTATCCGATAGTTTATGTAAATGT
TGGTGTGCGAGCTGATAGTGTTATTACAAGTGGTGGTGACTGGACAGAAT
GTCATCCACCTGGCCCAGGGCAGGCTGCGAGGGGTCACCAAGGATGGATA
CGTGTCCTACACTGGGATACCTTATGCAAGTATTACAGGCACTCAGGGGA
GATTCAAGGTCAGTTTACTTTTTGGCATAAAGTCTATACGGGTAAATCGT
GTACCAAGTGCATTACTTGACACTTTAGACCAAAATACAGACAGTCTGGT
TACAAAATAACTTTATACATTTTCAGAGAGCAGGGATTGCTCCGCTGTGG
CCTGACATCAGAAACTCCAGGACCTCAACCTGTTCGTTAGTGTCGGATGC
GGAGCCCTGTCTGCAGCTAGATGTCCACGTACCGTCTGCAGTGGGCGGGA
ATTGGCCCGTGCTGGTGTGGGTGACGGGGGGCAGCGGCCCCTACAGCCCC
GGCAGGATGGTGCACGAGGGGATCATCGTGGTCGTTGTACATCACAGGTA
CGACCACAACTCAGACTATATTTTTTTTGAATTTAGGATTTTAAATAAGT
AGGTACTGTTTCAGGCTGGGGCCATCAGGCTTTTTATGTTTACGAGACGA
GAATATTCCTGGTAACGCAGGAGTGAAAGACGCGGTTTTAGCATTACGAT
GGGTGCGCGATAATATAATTGCTTTCAAAGGAAACGCAGCCAAAGTCGTT
GTAGCTGGGCAAAGCTTCGGCGCGGCCATGGTGGAAGCCATACTACTGTC
AAATATGGCCCGTGGACTATACCACGGTGCTATATTGCAGAGCGGGAGTG
CACTATGCCCTTGGTCTTTCAACTATGATGCGGAGAAACGCGCCATGGCT
TTGGATAATGTGAGCGAGACGAAAAATGAGTTAGTGAAATCCTTACTGGA
TACCGAAACTGAGGACTTGGTGGCGAGAGGCAACAAACTAAATGTTCCTT
ATTTCCCATTCGGAATGTGCGTCGAAAAGGCATCAAAGAAAGAAGAGAGG
CTGATGTTCGAAGCGCCGCACGATGTACTGGCGAGGAAGAAGAATGACAC
GGTGCCCATGATCATTGGATATAATAACAACGAAGCATACGTGTTCGTGT
CCATGCTGAGGGAGGCTAATGTGTTGAGAAGAATTTCCAAATCTGTCACT
TTCCTGTTACCAGACGATTTAAAGTTTTTAAATGAAAGAGAACGGAAACA
AACTGGTAGACTTATAAAGGATATGTATTTCAAGAACAATTTGACAATGG
CTGCAGTGTTGGCGTATCACAGGTAAAGTTACTTATTCTTCGAGGACGTA
ACCTACGAGCTTATTAAAATGTTATGTAACGAGTTTCATGCAATTTACAA
CTAACATGGCAGGGACGCCTACTTCTCCAGCCACATCCACCGCAGCGTGC
GTCACCATGCGGCTACTGCGTCTGTCTTCTACTACCAGTTCTCATACTCC
GGTGACTTGGGGATTCAGGCAGAGCCTGGAGTACCGAAGAGAGGTGCAGC
GCATTCAGATGAACTGGCCTACTTGTTCTTTGATGGAAATCTTGAAAGAG
AAGAAGGAACTGTGCAGAGGCGCGTCATCAAACTATGGACGAACTTTGTG
AAACATTTGTAAGTATGTTTTTGTGTATACAAGTTTTTGCGTTAAAGAAA
TGATCAGCACGAGTCCGTTTGACTACAACACAAAACATTATATACCTGAT
TGTACTAGTTGTGTAATTTGGATGCAATTTACGGTTCACTACGAATGCAT
GGCCTTGCAATATTACTTGTACTCCAATGTAATTTCCAGGAACCCGTCAG
CCCAGAGCGATGTAAAGTGGGAGCCTACACAGCCTGATACATACCGCCTG
CTGGACATTGGCACCGAACTGTCGATGATAGACTACCCTCATTCGAAGAC
ATCGTACCTCTGGGATGAGATCTATGAGAAGTACTACTACACAAGGAACA
GGATTTCTAATTAAATATAGTTGTTCATTGTGCATTTTTATTTAAAAATG
GAT
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Coding sequence (CDS) from alignment at SFRU_RICE_015326:4314..10616-

>SFRICE022307-RA ID=SFRICE022307-RA|Name=SFRICE022307-RA|organism=Spodoptera frugiperda rice|type=CDS|length=3132bp|location=Sequence derived from alignment at SFRU_RICE_015326:4314..10616- (Spodoptera frugiperda rice)
TGCACTGCACACGTGTTCCCCGCGGAGCGATGTCGCGTGCGCGCGTTCCT
CGAGTCTGGGACCGTGTGTGGGGTGGAACGCCTGGCCGACGGAGACGTCA
AGTACGCCAGCTTCCGAGGAGTGCCTTACGCTAAGCAACCACTGGGAGAA
CTCAGGTTTAAGGAGTTGGAGCCTGCGGAGCCTTGGGACTATCACTTCGC
GACGGACGAGGGCCCGGTGTGCTACCAGCACGACGTCCTGTACGGGCGGC
TCATGCGGCCGCAGGGCATGAGCGAGTCCTGCATCCACGCCAACATCCAC
GTCCCCATGGAAGCGCTCCCGGACCAACATCCTGACGTCACGCTGCCCGG
CCTGCCGATCCTCGTGTTCATACATGGAGGAGGATTCGGATTCGGTTCTG
GTGATGCAGATCTACATGGGCCGGAGTATCTCGTCGGCAAGAAAGTCATC
GTCATCACGTTTAATTACAGGTTAAACGTGTTCGGCTTCTTATCAATGAA
CACGACCGCGATCCCCGGCAACGGTGGTCTGCGGGACCAGGTGACACTGC
TGCGCTGGGTGCAGAGGAACGCGAGGGCCTTCGGAGGGGACCCCACAGAC
GTGACGTTGGCCGGCCAGAGCGCCGGAGCCGTGGCCGCACATCTACTTAG
TTTATCCCCAGCGGCTGAGGGAGCTATATTAATGAGCGGAACAGCCACGA
GTCCCTTCTACAGCGCCTCTCCTGCGTATGCGCAACTAGTTAGAAACATG
TATTTGCAATTCTTGGGCATCACCTCGACTGACCCAGAGGACATCCAACG
CCAGCTCATCGAGCTACCCGCCGAGCGACTGAACGCCGCTCACACCAAAC
TTATAGATCAAATGGGACTAGTGACCTTCGGGCCCACCGTGGAGTCACCC
CTGCCGGGAGTTACCACCATCATCGATGACGACCCAGAGGCCCTGCTTAA
TAAAGGGCGAGGGAAAAATATTCCTCTCATAGTGGGCTACACGAATTCTG
AATGTGAAACCTTCCGCAATCGATTTGAAGCATTTGATCTTATCAAGAAG
ATTGCATCGCAGAGTATTCTTGTAGTTCCACCGAAATTGTTGTTCGCAAC
ACCACAGGAATCGTTGTCCAACTTGGTATCAAGAATGTTCGGAAGATATT
TTAACGGAAAAATTAATATGGATGGCTTTGTAAAATCGTGTTCCGAGGGC
TTCTATGAGTATCCCGCGTTAAAGCTGGCACAAAAACGTGCAGAACTTGA
TGGCACGCCCGTGTACCTGTACCAGTTCACGTTTGACAGTCCGACCAGCG
TCATCAAGGAGGTCATGGGCTTAAGTTACCAAGGAGCAGCTCATATCGAA
GATCTGACCTACGTGTTCAAAGCAAACTCGGTGCTTGAGGGACGGGAAGG
GGCCGCGCAGAGCTTAGAAGATTTGCGAATGAAGAATTTCATGACGGACT
TGATTGTCCAGTTCATGTCCTGCAGTAAACCGATTTGCGACGACAAGCAG
TCTTTATGGCCGGAGGACAATGGCAATCAAATCGAGGTGATAGAAGCTCC
CGGCGTGCTGCGGACCAACAGCAGGTCGCCGAGCCAGCTGGACGTGCTGG
ACTTCTTCGACAGCTTGCACAGCAGAGTCAACGCGCTGATAGTGTTATTA
CAAGTGGTGGTGACTGGACAGAATGTCATCCACCTGGCCCAGGGCAGGCT
GCGAGGGGTCACCAAGGATGGATACGTGTCCTACACTGGGATACCTTATG
CAAGTATTACAGGCACTCAGGGGAGATTCAAGAGAGCAGGGATTGCTCCG
CTGTGGCCTGACATCAGAAACTCCAGGACCTCAACCTGTTCGTTAGTGTC
GGATGCGGAGCCCTGTCTGCAGCTAGATGTCCACGTACCGTCTGCAGTGG
GCGGGAATTGGCCCGTGCTGGTGTGGGTGACGGGGGGCAGCGGCCCCTAC
AGCCCCGGCAGGATGGTGCACGAGGGGATCATCGTGGTCGTTGTACATCA
CAGGCTGGGGCCATCAGGCTTTTTATGTTTACGAGACGAGAATATTCCTG
GTAACGCAGGAGTGAAAGACGCGGTTTTAGCATTACGATGGGTGCGCGAT
AATATAATTGCTTTCAAAGGAAACGCAGCCAAAGTCGTTGTAGCTGGGCA
AAGCTTCGGCGCGGCCATGGTGGAAGCCATACTACTGTCAAATATGGCCC
GTGGACTATACCACGGTGCTATATTGCAGAGCGGGAGTGCACTATGCCCT
TGGTCTTTCAACTATGATGCGGAGAAACGCGCCATGGCTTTGGATAATGT
GAGCGAGACGAAAAATGAGTTAGTGAAATCCTTACTGGATACCGAAACTG
AGGACTTGGTGGCGAGAGGCAACAAACTAAATGTTCCTTATTTCCCATTC
GGAATGTGCGTCGAAAAGGCATCAAAGAAAGAAGAGAGGCTGATGTTCGA
AGCGCCGCACGATGTACTGGCGAGGAAGAAGAATGACACGGTGCCCATGA
TCATTGGATATAATAACAACGAAGCATACGTGTTCGTGTCCATGCTGAGG
GAGGCTAATGTGTTGAGAAGAATTTCCAAATCTGTCACTTTCCTGTTACC
AGACGATTTAAAGTTTTTAAATGAAAGAGAACGGAAACAAACTGGTAGAC
TTATAAAGGATATGTATTTCAAGAACAATTTGACAATGGCTGCAGTGTTG
GCGTATCACAGGGACGCCTACTTCTCCAGCCACATCCACCGCAGCGTGCG
TCACCATGCGGCTACTGCGTCTGTCTTCTACTACCAGTTCTCATACTCCG
GTGACTTGGGGATTCAGGCAGAGCCTGGAGTACCGAAGAGAGGTGCAGCG
CATTCAGATGAACTGGCCTACTTGTTCTTTGATGGAAATCTTGAAAGAGA
AGAAGGAACTGTGCAGAGGCGCGTCATCAAACTATGGACGAACTTTGTGA
AACATTTGAACCCGTCAGCCCAGAGCGATGTAAAGTGGGAGCCTACACAG
CCTGATACATACCGCCTGCTGGACATTGGCACCGAACTGTCGATGATAGA
CTACCCTCATTCGAAGACATCGTACCTCTGGGATGAGATCTATGAGAAGT
ACTACTACACAAGGAACAGGATTTCTAATTAA
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Synonyms
The feature 'SFRICE022307-RA' has the following synonyms
Synonym
SFRICE022307-PA
SFRICE022307
maker-SFRU_RICE_015326-snap-gene-0.14-mRNA-1