Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
AED | 0.66 |
QI | 0|0|0|0.5|1|1|4|0|133 |
eAED | 0.66 |
Full name | DV3020610 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >DV3020610-RA ID=DV3020610-RA|Name=DV3020610-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=402bp|location=Sequence derived from alignment at scaffold1527:16591..17994+ (Daktulosphaira vitifoliae)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAATTTGTAATTGTCATGTAATTTGTGATTCTCCAACTAAAAGCTT TATACTTAATGTAAAATCATATAATGCATATTTTGGATGTACCTCGTGTA CTCAGGAAGAATCGCCTCTTCGAACCAATGAATCATTTCGTTCTAAAACA CAGGAAGAATATCATGGTCTTGGACATTTCGCCGCTGACCGTTTCGCCCC CAGACTCTTGATATATAAATTTATTATTAACCCCTTTTCAAAAAAATACA TAGAAATTCGGTGTTTTAACAATAAGGGCATTGAAGCTAAAATGTTAAGA AGGCTAAATGACTACATTAAAAATGAAAAGAATGTAAAAAATCAAGGTCA TTATTTGCAATGCGCACTAAACGTGGGAGAGCGGAATGCAAAATATAATT AG back to topprotein sequence of DV3020610-RA >DV3020610-PA ID=DV3020610-PA|Name=DV3020610-RA|organism=Daktulosphaira vitifoliae|type=polypeptide|length=134bp
MEICNCHVICDSPTKSFILNVKSYNAYFGCTSCTQEESPLRTNESFRSKT QEEYHGLGHFAADRFAPRLLIYKFIINPFSKKYIEIRCFNNKGIEAKMLR RLNDYIKNEKNVKNQGHYLQCALNVGERNAKYN. back to topmRNA from alignment at scaffold1527:16591..17994+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >DV3020610-RA ID=DV3020610-RA|Name=DV3020610-RA|organism=Daktulosphaira vitifoliae|type=mRNA|length=1404bp|location=Sequence derived from alignment at scaffold1527:16591..17994+ (Daktulosphaira vitifoliae) ATGGAAATTTGTAATTGTCATGTAATTTGTGATTCTCCAACTAAAAGCTT
TATACTTAATGTAAAATCATATAATGCATATTTTGGATGTACCTCGTGTA
CTCAGGAAGGTTCATTCATAAATAATAGAATGTCATTTTTAAAAATAGAA
TCGCCTCTTCGAACCAATGAATCATTTCGTTCTAAAACACAGGAAGAATA
TCATGGTCTTGGACATTTCGCCGCTGACCGTTTCGCCCCCAGACTCTTGA
TATATAAATTTATTATTAACCCCTTTTCAAAAAAGTATAATTATATTAGC
CTAATCCTTTATTTTACAAGTCCTTAAAATCCAGTATAATGATAAAAATT
TTTTTATTTATACAATGTCACAAATTATTTAAATTTGATTTTTACTTAAA
ATAGTAAAAATTAAATTATAATTTAATTATTATAGATACATAGAAATTCG
GTGTTTTAACAATAAGGGCATTGAAGCTAAAATGTTAAGTTTATAGTTAT
TCCATTTATTCTGACACCGTAAATACAGACTATTTGATATGAACATAAGA
AAATGTGAGCCCAAAAAAAATTAAATGTATTCGTGAATATTAGAATTGTT
ATTGTAATATAAATACTATATATGCCAATCTATAATATTAGAAATATTTT
GATTATATCAGACGAAGTGTTATTATAAAATATTTCAAACACAAAATCAA
ATAATTACTGGTAAATTGAAAAAACGAAAAGAAATTTGAATACATTTTGT
TATTAATGCTCAACAGATAATTCATCATTTATTAAATGAAAAGTCGTATA
CAACACAATTGAGTTTTAAATTAAATAGTATAATCACAAATGAATGATAT
GATATTTTAAATACTTCACAAGAGTGCTTGTCACACTTAGAATATTTAAG
TATAACTTTAATAAATAGTAAACTTTTTAGAATATTTAACTTGAAGTCAA
AATTTCATAAGATGGGCTTAACTTTTTATTTTATCATTTTTAGTGATCTG
AACTTTGGTTAAAATTGCTTTATTTGTTTGAATATTTTTTTTCTAAAGTA
TTTATAATTTGTTTTTTTTTTAATATTTCATTGTATATTTGAAAAATGAA
ATTATTAATTTTATACATGAAAACCTTATAAAATGTGTAATTATTTATTT
ATTTATTATAAATTATACAAGCAATAGCCCAAAAAATATAATATGTATTA
AACAGTTAACTGGACAACTTAAAATTATCTAATAACTAAAAATGAAACAT
TAATAAACTTAAGCTTGACAAAGGGAAAAAAAAATTTAAATATTAAATAG
GAAGGCTAAATGACTACATTAAAAATGAAAAGAATGTAAAAAATCAAGGT
CATTATTTGCAATGCGCACTAAACGTGGGAGAGCGGAATGCAAAATATAA
TTAG back to topCoding sequence (CDS) from alignment at scaffold1527:16591..17994+ >DV3020610-RA ID=DV3020610-RA|Name=DV3020610-RA|organism=Daktulosphaira vitifoliae|type=CDS|length=402bp|location=Sequence derived from alignment at scaffold1527:16591..17994+ (Daktulosphaira vitifoliae) ATGGAAATTTGTAATTGTCATGTAATTTGTGATTCTCCAACTAAAAGCTT TATACTTAATGTAAAATCATATAATGCATATTTTGGATGTACCTCGTGTA CTCAGGAAGAATCGCCTCTTCGAACCAATGAATCATTTCGTTCTAAAACA CAGGAAGAATATCATGGTCTTGGACATTTCGCCGCTGACCGTTTCGCCCC CAGACTCTTGATATATAAATTTATTATTAACCCCTTTTCAAAAAAATACA TAGAAATTCGGTGTTTTAACAATAAGGGCATTGAAGCTAAAATGTTAAGA AGGCTAAATGACTACATTAAAAATGAAAAGAATGTAAAAAATCAAGGTCA TTATTTGCAATGCGCACTAAACGTGGGAGAGCGGAATGCAAAATATAATT AG back to top
Synonyms
The feature 'DV3020610-RA' has the following synonyms
Synonym |
snap_masked-scaffold1527-processed-gene-0.11-mRNA-1 |
|