GSSPFG00001269001-PA (polypeptide) Spodoptera frugiperda corn

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGSSPFG00001269001-RA
Unique NameGSSPFG00001269001-PA
Typepolypeptide
OrganismSpodoptera frugiperda corn (Fall armyworm - corn variant)
Sequence length220
Homology
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|93448306|gb|ABC84370.2| (cytochrome P450 [Spodoptera litura])

HSP 1 Score: 393.7 bits (1010), Expect = 5.100e-106
Identity = 196/210 (93.33%), Postives = 201/210 (95.71%), Query Frame = 0 
Query:    8 TYHYFPETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVVEDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFMLG 218
            T +   ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFP+GKQFEKCLEKVH FADNVIMERKKNW PGQS+  ED+VGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDT+PTMSDLAEMKYLEAVIKE LRLYPSVPFIAREVTEDFMLG
Sbjct:  172 TLYTICETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPMGKQFEKCLEKVHPFADNVIMERKKNWKPGQSNAGEDDVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTSPTMSDLAEMKYLEAVIKEILRLYPSVPFIAREVTEDFMLG 381
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|1274120824|ref|XP_022824488.1| (cytochrome P450 4C1-like [Spodoptera litura] >gi|1274120826|ref|XP_022824490.1| cytochrome P450 4C1-like [Spodoptera litura])

HSP 1 Score: 393.7 bits (1010), Expect = 5.100e-106
Identity = 196/210 (93.33%), Postives = 201/210 (95.71%), Query Frame = 0 
Query:    8 TYHYFPETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVVEDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFMLG 218
            T +   ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFP+GKQFEKCLEKVH FADNVIMERKKNW PGQS+  ED+VGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDT+PTMSDLAEMKYLEAVIKE LRLYPSVPFIAREVTEDFMLG
Sbjct:  172 TLYTICETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPMGKQFEKCLEKVHPFADNVIMERKKNWKPGQSNAGEDDVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTSPTMSDLAEMKYLEAVIKEILRLYPSVPFIAREVTEDFMLG 381
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|1226074482|gb|ASO98037.1| (cytochrome p450 CYP4S9 [Spodoptera exigua])

HSP 1 Score: 372.5 bits (955), Expect = 1.200e-99
Identity = 185/204 (90.69%), Postives = 193/204 (94.61%), Query Frame = 0 
Query:   14 ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVVEDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFMLG 218
            ETAMGTQLDSD STKTQEYKTAILQIGG+LMGRLT+VWLHNEYIFRKFP+GK FEK LEKVHSFAD+VIMERKKNW PGQ+D V D+VGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLM LADHPEVQERIYEECQ ILGDSD+ PTM DLAEMKYL+AVIKE LRLYPSVPFIAREVTEDFMLG
Sbjct:  178 ETAMGTQLDSDYSTKTQEYKTAILQIGGVLMGRLTKVWLHNEYIFRKFPMGKLFEKYLEKVHSFADDVIMERKKNWKPGQNDGVADDVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMWLADHPEVQERIYEECQRILGDSDSIPTMPDLAEMKYLDAVIKEVLRLYPSVPFIAREVTEDFMLG 381
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|24181416|gb|AAL48299.1| (cytochrome P450 CYP4S4 [Mamestra brassicae])

HSP 1 Score: 350.9 bits (899), Expect = 3.800e-93
Identity = 172/211 (81.52%), Postives = 191/211 (90.52%), Query Frame = 0 
Query:    8 TYHYFPETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVVEDEV--GGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            T +   ETAMGTQLD+D S+KT EYKTAIL+IG LL+GRLTRVWLHNEY+F+KFPIG++FE CLEKVHSFAD+VIMERKKNW PGQS+  ED+V  GGKKR AMLD+LLEAE KGEIDLEGIREEVNT MFEGHDTTAMA+V GLML+ADH EVQ+RI+EECQ ILGDSD TPTMSDLA+MKYLEAVIKETLRLYPSVPFIARE+TEDFML
Sbjct:  172 TLYTICETAMGTQLDADKSSKTLEYKTAILEIGNLLLGRLTRVWLHNEYLFKKFPIGRRFENCLEKVHSFADDVIMERKKNWKPGQSEFTEDDVSIGGKKRYAMLDLLLEAENKGEIDLEGIREEVNTLMFEGHDTTAMAIVLGLMLIADHEEVQDRIFEECQKILGDSDRTPTMSDLADMKYLEAVIKETLRLYPSVPFIAREITEDFML 382
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|1199397392|ref|XP_021193950.1| (cytochrome P450 4C1-like [Helicoverpa armigera] >gi|1402415488|gb|PZC75221.1| hypothetical protein B5X24_HaOG200081 [Helicoverpa armigera])

HSP 1 Score: 335.1 bits (858), Expect = 2.100e-88
Identity = 166/210 (79.05%), Postives = 184/210 (87.62%), Query Frame = 0 
Query:    8 TYHYFPETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVV-EDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            T +   ETAMGTQLDSD S KTQEYK+AIL IG LL  RLTRVWLHNEY F+   +GK+F+KCLEKVHSFAD+VIMERKKNW PGQS+   ED VGGKKRLAMLD+LLEAE KGEIDLEGIREEVNTFMFEGHDTTAMA+V GLML+ADH EVQ+RI+EECQ I  D+++TP+MSDLAEMKYLEAVIKETLRLYPSVPFIAR +TEDFML
Sbjct:  172 TLYIICETAMGTQLDSDKSAKTQEYKSAILSIGKLLFARLTRVWLHNEYFFKMHSLGKRFQKCLEKVHSFADDVIMERKKNWKPGQSEFTEEDSVGGKKRLAMLDLLLEAESKGEIDLEGIREEVNTFMFEGHDTTAMAIVLGLMLIADHEEVQDRIFEECQKIFPDAESTPSMSDLAEMKYLEAVIKETLRLYPSVPFIARAITEDFML 381
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|156619506|gb|ABU88427.1| (cytochrome p450 CYP4S1 [Helicoverpa armigera])

HSP 1 Score: 334.3 bits (856), Expect = 3.700e-88
Identity = 164/204 (80.39%), Postives = 182/204 (89.22%), Query Frame = 0 
Query:   14 ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVV-EDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            ETAMGTQLDSD S KTQEYK+AIL IG LL  RLTRVWLHNEY F+   +G++F+KCLEKVHSFAD+VIMERKKNW PGQS+   ED VGGKKRLAMLD+LLEAE KGEIDLEGIREEVNTFMFEGHDTTAMA+V GLML+ADH EVQ+RI+EECQ I  D+++TP+MSDLAEMKYLEAVIKETLRLYPSVPFIAR +TEDFML
Sbjct:  178 ETAMGTQLDSDKSAKTQEYKSAILSIGNLLFARLTRVWLHNEYFFKMHSLGRRFQKCLEKVHSFADDVIMERKKNWKPGQSEFTEEDSVGGKKRLAMLDLLLEAESKGEIDLEGIREEVNTFMFEGHDTTAMAIVLGLMLIADHEEVQDRIFEECQKIFPDAESTPSMSDLAEMKYLEAVIKETLRLYPSVPFIARAITEDFML 381
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|1496275842|ref|XP_026727614.1| (cytochrome P450 4C1-like [Trichoplusia ni])

HSP 1 Score: 325.9 bits (834), Expect = 1.300e-85
Identity = 161/205 (78.54%), Postives = 178/205 (86.83%), Query Frame = 0 
Query:   14 ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVVEDE--VGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            ETAMGTQLD+D S  T  YK AI++IGGLL+ RLTRVWLHNEYIFRKFPIGKQFEK L +V SFADNVIMERK  W PG+ D  ED+  +G KKRLAMLD+LLEAE KGEID EGIREEVNTFMFEGHDTTAMA+VFGLML+ADH EVQ+R+YEE QTIL DSD  P+M+DL +MKYLEAVIKETLRLYPSVPFIARE+TEDFML
Sbjct:  178 ETAMGTQLDADKSKSTVAYKNAIMEIGGLLLARLTRVWLHNEYIFRKFPIGKQFEKYLHQVRSFADNVIMERKSTWKPGEGDFKEDDDSIGQKKRLAMLDLLLEAENKGEIDFEGIREEVNTFMFEGHDTTAMAIVFGLMLIADHQEVQDRLYEELQTILDDSDKAPSMADLNDMKYLEAVIKETLRLYPSVPFIAREITEDFML 382
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|433338911|dbj|BAM73811.1| (cytochrome P450 [Bombyx mori])

HSP 1 Score: 293.1 bits (749), Expect = 9.300e-76
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 0 
Query:   14 ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSD--VVEDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            ETAMGTQLDSD S +T EYK AILQIG LL+ RLT+VWLHN++IFR+F +G++F+KCL++VHSFA NVI+ERK+    G+    V ED  G KKRLAMLD+LLEAE K EID EGI +EVNTFMFEGHDTTA+AL F LML+A+  +VQ+RIY+E Q I GDSD  PT+SD+AEMKYLEAV+KETLRLYPSVPFIARE+TEDFML
Sbjct:  178 ETAMGTQLDSDKSAETSEYKMAILQIGSLLLDRLTKVWLHNDFIFRQFTVGRKFQKCLKQVHSFAHNVIVERKRQRASGRDPTVVAEDVFGRKKRLAMLDLLLEAEEKNEIDFEGIMDEVNTFMFEGHDTTAVALTFSLMLVAEDDQVQDRIYKELQGIFGDSDRRPTISDVAEMKYLEAVVKETLRLYPSVPFIAREITEDFML 382
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|433339103|dbj|BAM73902.1| (cytochrome P450 [Bombyx mori])

HSP 1 Score: 293.1 bits (749), Expect = 9.300e-76
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 0 
Query:   14 ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSD--VVEDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            ETAMGTQLDSD S +T EYK AILQIG LL+ RLT+VWLHN++IFR+F +G++F+KCL++VHSFA NVI+ERK+    G+    V ED  G KKRLAMLD+LLEAE K EID EGI +EVNTFMFEGHDTTA+AL F LML+A+  +VQ+RIY+E Q I GDSD  PT+SD+AEMKYLEAV+KETLRLYPSVPFIARE+TEDFML
Sbjct:  178 ETAMGTQLDSDKSAETSEYKMAILQIGSLLLDRLTKVWLHNDFIFRQFTVGRKFQKCLKQVHSFAHNVIVERKRQRASGRDPTVVAEDVFGRKKRLAMLDLLLEAEEKNEIDFEGIMDEVNTFMFEGHDTTAVALTFSLMLVAEDDQVQDRIYKELQGIFGDSDRRPTISDVAEMKYLEAVVKETLRLYPSVPFIAREITEDFML 382
[Close]
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Match: gi|827563587|ref|XP_012552338.1| (cytochrome P450 4C1-like [Bombyx mori])

HSP 1 Score: 293.1 bits (749), Expect = 9.300e-76
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 0 
Query:   14 ETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRVWLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSD--VVEDEVGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGLMLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLYPSVPFIAREVTEDFML 217
            ETAMGTQLDSD S +T EYK AILQIG LL+ RLT+VWLHN++IFR+F +G++F+KCL++VHSFA NVI+ERK+    G+    V ED  G KKRLAMLD+LLEAE K EID EGI +EVNTFMFEGHDTTA+AL F LML+A+  +VQ+RIY+E Q I GDSD  PT+SD+AEMKYLEAV+KETLRLYPSVPFIARE+TEDFML
Sbjct:  178 ETAMGTQLDSDKSAETSEYKMAILQIGSLLLDRLTKVWLHNDFIFRQFTVGRKFQKCLKQVHSFAHNVIVERKRQRASGRDPTVVAEDVFGRKKRLAMLDLLLEAEEKNEIDFEGIMDEVNTFMFEGHDTTAVALTFSLMLVAEDDQVQDRIYKELQGIFGDSDRRPTISDVAEMKYLEAVVKETLRLYPSVPFIAREITEDFML 382
The following BLAST results are available for this feature:
BLAST of GSSPFG00001269001-RA vs. GenBank_protein
Analysis Date: 2019-07-12 (Diamond: corn OGS2.2 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
gi|93448306|gb|ABC84370.2|5.100e-10693.33cytochrome P450 [Spodoptera litura][more]
gi|1274120824|ref|XP_022824488.1|5.100e-10693.33cytochrome P450 4C1-like [Spodoptera litura] >gi|1... [more]
gi|1226074482|gb|ASO98037.1|1.200e-9990.69cytochrome p450 CYP4S9 [Spodoptera exigua][more]
gi|24181416|gb|AAL48299.1|3.800e-9381.52cytochrome P450 CYP4S4 [Mamestra brassicae][more]
gi|1199397392|ref|XP_021193950.1|2.100e-8879.05cytochrome P450 4C1-like [Helicoverpa armigera] >g... [more]
gi|156619506|gb|ABU88427.1|3.700e-8880.39cytochrome p450 CYP4S1 [Helicoverpa armigera][more]
gi|1496275842|ref|XP_026727614.1|1.300e-8578.54cytochrome P450 4C1-like [Trichoplusia ni][more]
gi|433338911|dbj|BAM73811.1|9.300e-7670.73cytochrome P450 [Bombyx mori][more]
gi|433339103|dbj|BAM73902.1|9.300e-7670.73cytochrome P450 [Bombyx mori][more]
gi|827563587|ref|XP_012552338.1|9.300e-7670.73cytochrome P450 4C1-like [Bombyx mori][more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
InterPro
Analysis Name: InterProScan on corn OGS2.2
Date Performed: 2019-07-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002401Cytochrome P450, E-class, group IPRINTSPR00463EP450Icoord: 190..208
score: 37.3
coord: 126..143
score: 22.98
coord: 146..172
score: 33.85
IPR001128Cytochrome P450PRINTSPR00385P450coord: 137..154
score: 37.22
coord: 191..202
score: 53.4
IPR001128Cytochrome P450PFAMPF00067p450coord: 11..216
e-value: 2.1E-46
score: 158.7
IPR036396Cytochrome P450 superfamilyGENE3D1.10.630.10coord: 3..219
e-value: 1.6E-50
score: 174.0
IPR036396Cytochrome P450 superfamilySUPERFAMILY48264Cytochrome P450coord: 8..217
NoneNo IPR availablePANTHERPTHR24291FAMILY NOT NAMEDcoord: 8..217
NoneNo IPR availablePANTHERPTHR24291:SF105CYTOCHROME P450 4P1-RELATEDcoord: 8..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14312contigscaffold_14312:2260..6517 -    View in Apollo
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond: corn OGS2.2 vs NR2019-07-12
InterProScan on corn OGS2.22019-07-12
Blast2GO on corn OGS2.22019-07-11 .804202
Spodoptera frugiperda corn annotation OGS2.22015-12-04
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
GSSPFG00001269001-RAGSSPFG00001269001-RASpodoptera frugiperda cornmRNAscaffold_14312 2260..6517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>GSSPFG00001269001-PA ID=GSSPFG00001269001-PA|Name=GSSPFG00001269001-RA|organism=Spodoptera frugiperda corn|type=polypeptide|length=220bp
YLLQKYVTYHYFPETAMGTQLDSDSSTKTQEYKTAILQIGGLLMGRLTRV
WLHNEYIFRKFPIGKQFEKCLEKVHSFADNVIMERKKNWTPGQSDVVEDE
VGGKKRLAMLDVLLEAERKGEIDLEGIREEVNTFMFEGHDTTAMALVFGL
MLLADHPEVQERIYEECQTILGDSDTTPTMSDLAEMKYLEAVIKETLRLY
PSVPFIAREVTEDFMLGKH.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036396Cyt_P450_sf
IPR001128Cyt_P450
IPR002401Cyt_P450_E_grp-I
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0004497monooxygenase activity
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037heme binding