SFRICE033104-PA (polypeptide) Spodoptera frugiperda rice

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	SFRICE033104-RA
Unique Name	SFRICE033104-PA
Type	polypeptide
Organism	Spodoptera frugiperda rice (Fall armyworm - rice variant)
Sequence length	218

Homology

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1493078183|gb|AYM01161.1| (glutathione-S-transferase epsilon class [Spodoptera littoralis])

HSP 1 Score: 412.5 bits (1059), Expect = 1.000e-111
Identity = 200/217 (92.17%), Postives = 207/217 (95.39%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVAL 218
            M VKLYTLDMSPPVRACMMACEIFNVPFEKIPV+L+AG+HLTPEYL+KNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKD KKRA VNQKLFFDTAIIFPRLRNITY IVMKGKTTIEPEL+EA+AEAY FMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEP KYPKTSAWL NLK  PYCKKWNEEGANALGA+VKSKV L
Sbjct:    1 MGVKLYTLDMSPPVRACMMACEIFNVPFEKIPVDLMAGDHLTPEYLQKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDVKKRAFVNQKLFFDTAIIFPRLRNITYFIVMKGKTTIEPELLEAVAEAYDFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPNKYPKTSAWLENLKTAPYCKKWNEEGANALGAFVKSKVTL 217

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1274142139|ref|XP_022815916.1| (glutathione S-transferase 1-like [Spodoptera litura])

HSP 1 Score: 408.7 bits (1049), Expect = 1.500e-110
Identity = 197/217 (90.78%), Postives = 207/217 (95.39%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVAL 218
            M VKLYTLDMSPPVRACMMACEIFNVPFEKIPV+L+AG+HLTPEYL+KNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKD KKRA VNQKLFFDTAIIFPRLRNITY IV+KGKTTIEPEL+EA+AEAY F+EAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEP KYPKTSAWL NLK  PYCKKWNEEG+NALGA+VKSKV L
Sbjct:    1 MGVKLYTLDMSPPVRACMMACEIFNVPFEKIPVDLMAGDHLTPEYLQKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDVKKRAFVNQKLFFDTAIIFPRLRNITYFIVLKGKTTIEPELLEAVAEAYDFIEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPNKYPKTSAWLENLKTAPYCKKWNEEGSNALGAFVKSKVTL 217

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1493077915|gb|AYM01160.1| (glutathione-S-transferase epsilon class [Spodoptera littoralis])

HSP 1 Score: 342.4 bits (877), Expect = 1.300e-90
Identity = 159/216 (73.61%), Postives = 186/216 (86.11%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVA 217
            M VKLY LDMSPPVRACMMA  +FNVPFEKI VN+  GEHLTPEYLKKNPLHT+PV+EDGD+T+HDSHAI+ YLADTYGKD+SWYPKD KKR LVNQKLFF+  ++F +LRNITYNIV+KGK TIEPEL++ + E Y FMEAFLSR+KYIA DHVTIADI IL+ +++ + ILP++ +KYPK  AWL  LKATPYCKK+NEEGANALGAYVK  V+
Sbjct:    1 MGVKLYALDMSPPVRACMMALGVFNVPFEKILVNVQGGEHLTPEYLKKNPLHTIPVLEDGDITIHDSHAILTYLADTYGKDDSWYPKDVKKRTLVNQKLFFNAGVMFQKLRNITYNIVLKGKKTIEPELLDGVTEGYEFMEAFLSRSKYIAGDHVTIADIAILSTVSTQDLILPIDAQKYPKLKAWLEELKATPYCKKYNEEGANALGAYVKKSVS 216

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|668728195|gb|AIH07584.1| (glutathione S-transferase epsilon 9 [Spodoptera litura])

HSP 1 Score: 342.4 bits (877), Expect = 1.300e-90
Identity = 159/216 (73.61%), Postives = 187/216 (86.57%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVA 217
            M VKLY LDMSPPVRACMMA  +FNVPFEKI VN+  GEHLTPEYLKKNPLHT+PV+EDGD+T+HDSHAI+ YLADTYGKD+SWYPKD KKR LVNQKLFF+  ++F +LRNITYNIV+KGK TIEPEL++ + E Y FMEAFLSR+KYIAADHVTIADI IL+ +++ + ILP++ +K+PK  AWL  LKATPYCKK+NEEGANALGAYVK  V+
Sbjct:    1 MGVKLYALDMSPPVRACMMALGVFNVPFEKILVNVQGGEHLTPEYLKKNPLHTIPVLEDGDITIHDSHAILTYLADTYGKDDSWYPKDVKKRTLVNQKLFFNAGVMFQKLRNITYNIVLKGKKTIEPELLDGVTEGYEFMEAFLSRSKYIAADHVTIADIAILSTVSTQDLILPIDAQKFPKLKAWLEELKATPYCKKYNEEGANALGAYVKKSVS 216

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1274142701|ref|XP_022816223.1| (uncharacterized protein LOC111349355 [Spodoptera litura])

HSP 1 Score: 342.4 bits (877), Expect = 1.300e-90
Identity = 159/216 (73.61%), Postives = 187/216 (86.57%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVA 217
            M VKLY LDMSPPVRACMMA  +FNVPFEKI VN+  GEHLTPEYLKKNPLHT+PV+EDGD+T+HDSHAI+ YLADTYGKD+SWYPKD KKR LVNQKLFF+  ++F +LRNITYNIV+KGK TIEPEL++ + E Y FMEAFLSR+KYIAADHVTIADI IL+ +++ + ILP++ +K+PK  AWL  LKATPYCKK+NEEGANALGAYVK  V+
Sbjct:    1 MGVKLYALDMSPPVRACMMALGVFNVPFEKILVNVQGGEHLTPEYLKKNPLHTIPVLEDGDITIHDSHAILTYLADTYGKDDSWYPKDVKKRTLVNQKLFFNAGVMFQKLRNITYNIVLKGKKTIEPELLDGVTEGYEFMEAFLSRSKYIAADHVTIADIAILSTVSTQDLILPIDAQKFPKLKAWLEELKATPYCKKYNEEGANALGAYVKKSVS 216

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1274142141|ref|XP_022815917.1| (glutathione S-transferase 1-like [Spodoptera litura])

HSP 1 Score: 340.5 bits (872), Expect = 5.100e-90
Identity = 162/216 (75.00%), Postives = 184/216 (85.19%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVA 217
            MVVKLYT +MSPPVRACMMACEIFNVPFEKIP+++ AGEHLTPE+LKKNP+H VPVMEDGD+TLHDSHAI+ YLADTYGKD+SWYPKD KKRALVNQKL F+  IIF R RNIT  +V+ GK TIEPEL+ A+ E Y FMEAFLSRTKYIA DHVTIAD+ ILAVMTSL  I+ ++ +KYPKT AWL NLK  PYCKK++E GAN L AYV S+VA
Sbjct:    1 MVVKLYTYNMSPPVRACMMACEIFNVPFEKIPIDIQAGEHLTPEFLKKNPIHQVPVMEDGDLTLHDSHAILPYLADTYGKDDSWYPKDVKKRALVNQKLIFNAVIIFARARNITGQVVLTGKRTIEPELIAAVTEGYEFMEAFLSRTKYIAGDHVTIADVAILAVMTSLTQIIKLDAQKYPKTLAWLENLKTAPYCKKYDEAGANELAAYVNSRVA 216

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1274142143|ref|XP_022815918.1| (glutathione S-transferase 1-like [Spodoptera litura])

HSP 1 Score: 340.5 bits (872), Expect = 5.100e-90
Identity = 163/216 (75.46%), Postives = 184/216 (85.19%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVKSKVA 217
            MVVKLYT DMSPPVRACMMACEIFNVPFEKIPV+L AGEHLTPE+LKKNP+H VPVMEDGD+TLHDSHAI+ YLADTYGKD+SWYPKD KKRALVNQKL FD  II  R R++T  +VM GK TIEP+L+ A+ E Y FMEAFLSRTKYIA DHVTIAD+ ILAV+TSL  I+ ++ +KYPKTSAWL NLK  PYCKK++E GAN L AYV S+VA
Sbjct:    1 MVVKLYTYDMSPPVRACMMACEIFNVPFEKIPVDLQAGEHLTPEFLKKNPIHQVPVMEDGDLTLHDSHAILPYLADTYGKDDSWYPKDVKKRALVNQKLIFDAVIICARARDVTGQVVMTGKRTIEPKLIAAVTEGYEFMEAFLSRTKYIAGDHVTIADVAILAVLTSLTQIIKLDAQKYPKTSAWLENLKIAPYCKKYDEAGANELAAYVNSRVA 216

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|1493079318|gb|AYM01165.1| (glutathione-S-transferase epsilon class [Spodoptera littoralis])

HSP 1 Score: 322.4 bits (825), Expect = 1.400e-84
Identity = 149/212 (70.28%), Postives = 179/212 (84.43%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYVK 213
            M VKLY +D SPP RACM+ CEIF +PFEKIPV+L  GEHL P YL+KNPLHT+PV+EDGD+ L+DSHAIMAYLADTYGKDESWYPKD KKRALVNQKLFF+TA+I+ RLRNITY +  +G+ T+E + ++ IAE YGF+EAFLS+TKYIA DH+TIADI IL+ +T+LE+ILP++ KKYPKTSAWL + KATPY KK NEEGA AL   +K
Sbjct:    1 MGVKLYVMDFSPPSRACMLTCEIFGIPFEKIPVDLFKGEHLAPNYLQKNPLHTIPVLEDGDLILYDSHAIMAYLADTYGKDESWYPKDVKKRALVNQKLFFNTAVIYRRLRNITYYVFQRGRKTLEQDWLDDIAEGYGFLEAFLSKTKYIAGDHITIADIAILSHLTNLEYILPIDAKKYPKTSAWLEDFKATPYAKKHNEEGAKALNDLLK 212

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|668728205|gb|AIH07589.1| (glutathione S-transferase epsilon 14 [Spodoptera litura])

HSP 1 Score: 315.8 bits (808), Expect = 1.300e-82
Identity = 146/207 (70.53%), Postives = 177/207 (85.51%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANAL 208
            M VKLY +D SPP RACM+ CEI  +PFEKIPV+L  GEHLTPEYL+KNPLHT+PV+EDGD+ L+DSHAI+AYLADTY KDESWYPKD KKRALVNQKLFF+ A+IF RLR I+Y ++ KG+ T+E + ++ I EAYGF+EAFLS+TKYIAADH+TIAD+ IL+ +T+LE+ILPV+ +KYPKTSAWL + KATPY KK NEEGA AL
Sbjct:    1 MGVKLYVMDFSPPSRACMLTCEILGIPFEKIPVDLFKGEHLTPEYLEKNPLHTIPVLEDGDLILYDSHAILAYLADTYAKDESWYPKDVKKRALVNQKLFFNVAVIFRRLRIISYYVIQKGRKTLEQDWLDDIIEAYGFLEAFLSKTKYIAADHITIADLAILSFLTTLEYILPVDAEKYPKTSAWLEDFKATPYAKKRNEEGARAL 207

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BLAST of SFRICE033104-RA vs. GenBank_protein
Match: gi|668728193|gb|AIH07583.1| (glutathione S-transferase epsilon 8 [Spodoptera litura])

HSP 1 Score: 303.1 bits (775), Expect = 8.900e-79
Identity = 142/211 (67.30%), Postives = 175/211 (82.94%), Query Frame = 0

Query:    1 MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNPLHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLFFDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYIAADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWNEEGANALGAYV 212
            M VKLY  D SPPVR+ MMA +IFNVPFEKI ++L+  EH  P+Y++KNP+HT+PV+EDGD+TLHDSHAIMAYLADTYGKD+SWYPKD KKRALVNQKLFF T +IFPRLR ITY ++ KG+  IE E ++ I EA GF+E FLSRTK+IA DHVTIAD+ +L+ ++S+E ILP++PKKYPKT AWL  +KATPYCKK+NEEG  +L A +
Sbjct:    1 MGVKLYAADFSPPVRSSMMALDIFNVPFEKITLDLLKLEHHDPKYVEKNPIHTIPVLEDGDLTLHDSHAIMAYLADTYGKDDSWYPKDIKKRALVNQKLFFTTGVIFPRLRIITYYLLQKGRKAIEQEWLDNIEEAIGFVEQFLSRTKFIALDHVTIADVAVLSHLSSVEPILPIDPKKYPKTVAWLEIMKATPYCKKYNEEGVKSLTAII 211

The following BLAST results are available for this feature:

BLAST of SFRICE033104-RA vs. GenBank_protein

BLAST of SFRICE033104-RA vs. GenBank_protein
Analysis Date: 2019-07-12 (Diamond: rice OGS2.3 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
gi\|1493078183\|gb\|AYM01161.1\|	1.000e-111	92.17	glutathione-S-transferase epsilon class [Spodopter...	[more]
gi\|1274142139\|ref\|XP_022815916.1\|	1.500e-110	90.78	glutathione S-transferase 1-like [Spodoptera litur...	[more]
gi\|1493077915\|gb\|AYM01160.1\|	1.300e-90	73.61	glutathione-S-transferase epsilon class [Spodopter...	[more]
gi\|668728195\|gb\|AIH07584.1\|	1.300e-90	73.61	glutathione S-transferase epsilon 9 [Spodoptera li...	[more]
gi\|1274142701\|ref\|XP_022816223.1\|	1.300e-90	73.61	uncharacterized protein LOC111349355 [Spodoptera l...	[more]
gi\|1274142141\|ref\|XP_022815917.1\|	5.100e-90	75.00	glutathione S-transferase 1-like [Spodoptera litur...	[more]
gi\|1274142143\|ref\|XP_022815918.1\|	5.100e-90	75.46	glutathione S-transferase 1-like [Spodoptera litur...	[more]
gi\|1493079318\|gb\|AYM01165.1\|	1.400e-84	70.28	glutathione-S-transferase epsilon class [Spodopter...	[more]
gi\|668728205\|gb\|AIH07589.1\|	1.300e-82	70.53	glutathione S-transferase epsilon 14 [Spodoptera l...	[more]
gi\|668728193\|gb\|AIH07583.1\|	8.900e-79	67.30	glutathione S-transferase epsilon 8 [Spodoptera li...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity

InterPro

Analysis Name: InterProScan on rice OGS2.3
Date Performed: 2019-07-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004046	Glutathione S-transferase, C-terminal	PFAM	PF00043	GST_C	coord: 121..193 e-value: 7.0E-9 score: 35.8
None	No IPR available	GENE3D	3.40.30.10		coord: 1..80 e-value: 4.4E-26 score: 93.2
None	No IPR available	GENE3D	1.20.1050.10		coord: 81..216 e-value: 4.4E-44 score: 152.1
None	No IPR available	SFLD	SFLDG00358	Main_(cytGST)	coord: 2..215 e-value: 0.0 score: 253.0
None	No IPR available	SFLD	SFLDG01153	Main.4:_Theta-like	coord: 2..215 e-value: 0.0 score: 253.0
None	No IPR available	PANTHER	PTHR43969:SF4	FI01423P-RELATED	coord: 3..213
None	No IPR available	PANTHER	PTHR43969	FAMILY NOT NAMED	coord: 3..213
None	No IPR available	CDD	cd03177	GST_C_Delta_Epsilon	coord: 90..208 e-value: 1.70574E-45 score: 144.983
IPR004045	Glutathione S-transferase, N-terminal	PFAM	PF13417	GST_N_3	coord: 5..79 e-value: 2.2E-13 score: 50.4
IPR004045	Glutathione S-transferase, N-terminal	PROSITE	PS50404	GST_NTER	coord: 1..82 score: 22.598
IPR010987	Glutathione S-transferase, C-terminal-like	PROSITE	PS50405	GST_CTER	coord: 88..215 score: 18.011
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 2..87
IPR036282	Glutathione S-transferase, C-terminal domain superfamily	SUPERFAMILY	47616	GST C-terminal domain-like	coord: 73..202

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
SFRU_RICE_015775	contig	SFRU_RICE_015775:761..2944 - View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond: rice OGS2.3 vs NR	2019-07-12
InterProScan on rice OGS2.3	2019-07-12
Blast2GO on rice OGS2.3	2019-07-11 .942389
Spodoptera frugiperda rice annotation OGS2.3	2015-12-04

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
SFRICE033104-RA	SFRICE033104-RA	Spodoptera frugiperda rice	mRNA	SFRU_RICE_015775 598..2989 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>SFRICE033104-PA ID=SFRICE033104-PA|Name=SFRICE033104-RA|organism=Spodoptera frugiperda rice|type=polypeptide|length=218bp
MVVKLYTLDMSPPVRACMMACEIFNVPFEKIPVNLIAGEHLTPEYLKKNP
LHTVPVMEDGDVTLHDSHAIMAYLADTYGKDESWYPKDTKKRALVNQKLF
FDTAIIFPRLRNITYNIVMKGKTTIEPELMEAIAEAYGFMEAFLSRTKYI
AADHVTIADIGILAVMTSLEHILPVEPKKYPKTSAWLANLKATPYCKKWN
EEGANALGAYVKSKVAL.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0016740	transferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036282	Glutathione-S-Trfase_C_sf
IPR036249	Thioredoxin-like_sf
IPR010987	Glutathione-S-Trfase_C-like
IPR004045	Glutathione_S-Trfase_N
IPR004046	GST_C

Orthology

View orthology data for SFRICE033104-PA